RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 H0YIG0 161 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 UBXN8O00124 270 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 FOXE1O00358 373 aaPredicted RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 E2F3O00716 465 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 COPEO14579 308 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 CLGNO14967 610 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 CASC3O15234 703 aaKnown RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 TM9SF1O15321 606 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 BIRC5O15392 142 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 RGS16O15492 202 aaPredicted RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 TAPBPO15533 448 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 RRP8O43159 456 aaKnown RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 TYROBPO43914 113 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 PLIN3O60664 434 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 PRAMEF10O60809 474 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 CTSVO60911 334 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 SMIM24O75264 130 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 H2AFYO75367 372 aaKnown RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 SUPT3HO75486 399 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 CLEC3AO75596 197 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 SCRG1O75711 98 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 WDR47O94967 919 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 SCELO95171 688 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 GUCA1CO95843 209 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 TOP3BO95985 862 aaKnown RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 OTCP00480 354 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 KLK3P07288 261 aaPredicted RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 SERPINA6P08185 405 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 RPS17P08708 135 aaKnown RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 RAB40ALP0C0E4 278 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 SBK3P0C264 359 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 MYZAPP0CAP1 466 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 EBLN1P0CF75 366 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 C1GALT1C1LP0DN25 315 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 PIM1P11309 404 aaPredicted RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 CDH1P12830 882 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 GFAPP14136 432 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 PVRP15151 417 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 EPORP19235 508 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 ITIH1P19827 911 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 IMPDH1P20839 514 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 IL10P22301 178 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 MPSTP25325 297 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 PSMB5P28074 263 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 EIF2S3P41091 472 aaKnown RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 STAT5AP42229 794 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 PIK3CBP42338 1070 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 SLCO1A2P46721 670 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 PPM1FP49593 454 aaPredicted RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 SEPHS1P49903 392 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 ATP1A2P50993 1020 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 PGGT1BP53609 377 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 PKNOX1P55347 436 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 CLDN6P56747 220 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 PSMA6P60900 246 aaKnown RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 CSNK1G2P78368 415 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 REEP5Q00765 189 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 IRF9Q00978 393 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 MC1RQ01726 317 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 FOXM1Q08050 763 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 ASPHQ12797 758 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 LCP2Q13094 533 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 CASP8Q14790 479 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 HERC3Q15034 1050 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 GPR19Q15760 415 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 NDUFA9Q16795 377 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 PFKFB4Q16877 469 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 ADPRMQ3LIE5 342 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 KRT71Q3SY84 523 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 TMEM35AQ53FP2 167 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 SNAP47Q5SQN1 464 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 CEP85LQ5SZL2 805 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 LIPJQ5W064 366 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 GRHL2Q6ISB3 625 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 PWWP2BQ6NUJ5 590 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 FBXO42Q6P3S6 717 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 NXPE4Q6UWF7 544 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 SUSD1Q6UWL2 747 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 C6orf15Q6UXA7 325 aaPredicted RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 TMIGD1Q6UXZ0 262 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 ZYG11AQ6WRX3 759 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 MBOAT1Q6ZNC8 495 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 RNF165Q6ZSG1 346 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 HDXQ7Z353 690 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 VN1R4Q7Z5H5 301 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 TRIM73Q86UV7 250 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 TMEM126BQ8IUX1 230 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 MCATQ8IVS2 390 aaKnown RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 SRRM1Q8IYB3 904 aaKnown RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 LAS2Q8IYD9 372 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 PLD6Q8N2A8 252 aaKnown RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 SPATA6LQ8N4H0 392 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 AFAP1L2Q8N4X5 818 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 CSNK1A1LQ8N752 337 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 MFSD9Q8NBP5 474 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 CAMKVQ8NCB2 501 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 SRFBP1Q8NEF9 429 aaKnown RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 OR1L3Q8NH93 324 aa3.36□□□□□ -1.87
TRIM59-202ENST00000468542 UHMK1Q8TAS1 419 aaKnown RBP3.36□□□□□ -1.87
TRIM59-202ENST00000468542 NT5CQ8TCD5 201 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms