RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 CTAGE6Q86UF2 777 aa23.06■■□□□ 1.28
PTCH1-210ENST00000468211 SARGQ9BW04 601 aa23.06■■□□□ 1.28
PTCH1-210ENST00000468211 KCNF1Q9H3M0 494 aa23.06■■□□□ 1.28
PTCH1-210ENST00000468211 ABI3Q9P2A4 366 aa23.06■■□□□ 1.28
PTCH1-210ENST00000468211 VWA7Q9Y334 891 aa23.06■■□□□ 1.28
PTCH1-210ENST00000468211 A0A1B0GUH1 482 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 NDUFS4O43181 175 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 UNC5CO95185 931 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 GUCA1CO95843 209 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 AGTR2P50052 363 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 OLR1P78380 273 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 ABRAXAS2Q15018 415 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 SFT2D3Q587I9 215 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 ACER2Q5QJU3 275 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 CRLF3Q8IUI8 442 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 GABPB2Q8TAK5 448 aaPredicted RBP23.05■■□□□ 1.28
PTCH1-210ENST00000468211 NEIL2Q969S2 332 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 RELTQ969Z4 430 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 FBXL8Q96CD0 374 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 FAM129AQ9BZQ8 928 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 KCNK13Q9HB14 408 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 TEKT2Q9UIF3 430 aa23.05■■□□□ 1.28
PTCH1-210ENST00000468211 PCNX1Q96RV3 2341 aa23.04■■□□□ 1.28
PTCH1-210ENST00000468211 TRBC2A0A5B9 178 aa23.04■■□□□ 1.28
PTCH1-210ENST00000468211 GALR3O60755 368 aaPredicted RBP23.04■■□□□ 1.28
PTCH1-210ENST00000468211 AP1S2P56377 157 aa23.04■■□□□ 1.28
PTCH1-210ENST00000468211 NSDHLQ15738 373 aa23.04■■□□□ 1.28
PTCH1-210ENST00000468211 DEFB134Q4QY38 66 aa23.04■■□□□ 1.28
PTCH1-210ENST00000468211 PAPD4Q6PIY7 484 aaKnown RBP23.04■■□□□ 1.28
PTCH1-210ENST00000468211 SBSNQ6UWP8 590 aa23.04■■□□□ 1.28
PTCH1-210ENST00000468211 PLPP5Q8NEB5 264 aa23.04■■□□□ 1.28
PTCH1-210ENST00000468211 SUN3Q8TAQ9 357 aa23.04■■□□□ 1.28
PTCH1-210ENST00000468211 ZNF354BQ96LW1 612 aa23.04■■□□□ 1.28
PTCH1-210ENST00000468211 SIGLEC12Q96PQ1 595 aa23.04■■□□□ 1.28
PTCH1-210ENST00000468211 HES7Q9BYE0 225 aa23.04■■□□□ 1.28
PTCH1-210ENST00000468211 ANKRD10Q9NXR5 420 aa23.04■■□□□ 1.28
PTCH1-210ENST00000468211 PSAT1Q9Y617 370 aa23.04■■□□□ 1.28
PTCH1-210ENST00000468211 TEX264Q9Y6I9 313 aa23.04■■□□□ 1.28
PTCH1-210ENST00000468211 SERPIND1P05546 499 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 TUBA3CQ13748 450 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 HERC3Q15034 1050 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 ZNF766Q5HY98 468 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 STEAP4Q687X5 459 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 FAM45BPQ6NSW5 357 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 TUBA3EQ6PEY2 450 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 KLHL7Q8IXQ5 586 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 PDIK1LQ8N165 341 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 MDS2Q8NDY4 140 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 DNAJB8Q8NHS0 232 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 M1APQ8TC57 530 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 FAM45AQ8TCE6 357 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 TSNARE1Q96NA8 513 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 OR1F2PQ96R84 312 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 TRIM51Q9BSJ1 452 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 TRIM54Q9BYV2 358 aa23.03■■□□□ 1.28
PTCH1-210ENST00000468211 MAGEB17A8MXT2 336 aa23.02■■□□□ 1.28
PTCH1-210ENST00000468211 TP73O15350 636 aa23.02■■□□□ 1.28
PTCH1-210ENST00000468211 ZSCAN12O43309 604 aa23.02■■□□□ 1.28
PTCH1-210ENST00000468211 CHST10O43529 356 aa23.02■■□□□ 1.28
PTCH1-210ENST00000468211 CRYABP02511 175 aaKnown RBP23.02■■□□□ 1.28
PTCH1-210ENST00000468211 ZNF888P0CJ79 500 aaPredicted RBP23.02■■□□□ 1.28
PTCH1-210ENST00000468211 ALOX12P18054 663 aa23.02■■□□□ 1.28
PTCH1-210ENST00000468211 PWP1Q13610 501 aa23.02■■□□□ 1.28
PTCH1-210ENST00000468211 MORF4L2Q15014 288 aa23.02■■□□□ 1.28
PTCH1-210ENST00000468211 EXT1Q16394 746 aa23.02■■□□□ 1.28
PTCH1-210ENST00000468211 PPP1R3AQ16821 1122 aa23.02■■□□□ 1.28
PTCH1-210ENST00000468211 ANKRD53Q8N9V6 530 aa23.02■■□□□ 1.28
PTCH1-210ENST00000468211 SLC5A11Q8WWX8 675 aa23.02■■□□□ 1.28
PTCH1-210ENST00000468211 PDLIM5Q96HC4 596 aaKnown RBP23.02■■□□□ 1.28
PTCH1-210ENST00000468211 CAPZA3Q96KX2 299 aa23.02■■□□□ 1.28
PTCH1-210ENST00000468211 MMP25Q9NPA2 562 aa23.02■■□□□ 1.28
PTCH1-210ENST00000468211 SEC14L3Q9UDX4 400 aa23.02■■□□□ 1.28
PTCH1-210ENST00000468211 CORO1CQ9ULV4 474 aaPredicted RBP23.02■■□□□ 1.28
PTCH1-210ENST00000468211 USP27XA6NNY8 438 aa23.01■■□□□ 1.27
PTCH1-210ENST00000468211 FHP07954 510 aa23.01■■□□□ 1.27
PTCH1-210ENST00000468211 CD96P40200 585 aa23.01■■□□□ 1.27
PTCH1-210ENST00000468211 SCTRP47872 440 aa23.01■■□□□ 1.27
PTCH1-210ENST00000468211 ACTN3Q08043 901 aaPredicted RBP23.01■■□□□ 1.27
PTCH1-210ENST00000468211 CSHL1Q14406 222 aa23.01■■□□□ 1.27
PTCH1-210ENST00000468211 ZNF460Q14592 562 aa23.01■■□□□ 1.27
PTCH1-210ENST00000468211 USP10Q14694 798 aaKnown RBP23.01■■□□□ 1.27
PTCH1-210ENST00000468211 STRA8Q7Z7C7 330 aa23.01■■□□□ 1.27
PTCH1-210ENST00000468211 TICAM1Q8IUC6 712 aa23.01■■□□□ 1.27
PTCH1-210ENST00000468211 ANKMY2Q8IV38 441 aa23.01■■□□□ 1.27
PTCH1-210ENST00000468211 NT5CQ8TCD5 201 aa23.01■■□□□ 1.27
PTCH1-210ENST00000468211 TBC1D20Q96BZ9 403 aa23.01■■□□□ 1.27
PTCH1-210ENST00000468211 KLHL1Q9NR64 748 aa23.01■■□□□ 1.27
PTCH1-210ENST00000468211 ZFP69BQ9UJL9 534 aa23.01■■□□□ 1.27
PTCH1-210ENST00000468211 ABCA12Q86UK0 2595 aa23.01■■□□□ 1.27
PTCH1-210ENST00000468211 TRGV8A0A0C4DH27 118 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 C4orf51C9J302 202 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 CDC7O00311 574 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 ENO2P09104 434 aaPredicted RBP23■■□□□ 1.27
PTCH1-210ENST00000468211 PRF1P14222 555 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 ZNF37AP17032 561 aaPredicted RBP23■■□□□ 1.27
PTCH1-210ENST00000468211 TCP1P17987 556 aaKnown RBP23■■□□□ 1.27
PTCH1-210ENST00000468211 SAT1P21673 171 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 IL10P22301 178 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 ITGA8P53708 1063 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 OR4D2P58180 307 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms