RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 USP7Q93009 1102 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 NXPE2Q96DL1 559 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 CMTM7Q96FZ5 175 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 PRR11Q96HE9 360 aaPredicted RBP14.5□□□□□ -0.09
SNIP1-202ENST00000468040 KCNA7Q96RP8 456 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 SORT1Q99523 831 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 MTERF1Q99551 399 aaKnown RBP14.5□□□□□ -0.09
SNIP1-202ENST00000468040 CENPKQ9BS16 269 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 SCNM1Q9BWG6 230 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 SLC7A5P2Q9GIP4 190 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 C20orf27Q9GZN8 174 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 SPRTNQ9H040 489 aaPredicted RBP14.5□□□□□ -0.09
SNIP1-202ENST00000468040 BRF2Q9HAW0 419 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 DMRT3Q9NQL9 472 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 HAO1Q9UJM8 370 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 KLK13Q9UKR3 277 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 WASF3Q9UPY6 502 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 RUVBL1Q9Y265 456 aaKnown RBP14.5□□□□□ -0.09
SNIP1-202ENST00000468040 TIMM22Q9Y584 194 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 PCDHB3Q9Y5E6 796 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 MDC1Q14676 2089 aaKnown RBP14.5□□□□□ -0.09
SNIP1-202ENST00000468040 PMS2P1A4D2B8 440 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 LRIT2A6NDA9 550 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 ZNF749O43361 778 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 CPNE3O75131 537 aaKnown RBP14.49□□□□□ -0.09
SNIP1-202ENST00000468040 DXOO77932 396 aaKnown RBP14.49□□□□□ -0.09
SNIP1-202ENST00000468040 CTSBP07858 339 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 ADRB1P08588 477 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 HSD3B1P14060 373 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 PTX3P26022 381 aaPredicted RBP14.49□□□□□ -0.09
SNIP1-202ENST00000468040 HSD3B2P26439 372 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 MDH1P40925 334 aaKnown RBP14.49□□□□□ -0.09
SNIP1-202ENST00000468040 RPL14P50914 215 aaKnown RBP14.49□□□□□ -0.09
SNIP1-202ENST00000468040 NEK2P51955 445 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 FOXA1P55317 472 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 OCRLQ01968 901 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 TGM3Q08188 693 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 CAMK2BQ13554 666 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 RTP5Q14D33 572 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 MUM1Q2TAK8 710 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 TMEM35AQ53FP2 167 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 SGO1Q5FBB7 561 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 CLEC6AQ6EIG7 209 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 TMEM214Q6NUQ4 689 aaKnown RBP14.49□□□□□ -0.09
SNIP1-202ENST00000468040 RNF165Q6ZSG1 346 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 CHSY3Q70JA7 882 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 ABHD13Q7L211 337 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 ZNF781Q8N8C0 355 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 GBP7Q8N8V2 638 aaPredicted RBP14.49□□□□□ -0.09
SNIP1-202ENST00000468040 AGR3Q8TD06 166 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 C7orf26Q96N11 449 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 SLC46A1Q96NT5 459 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 MS4A8Q9BY19 250 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 SLC6A16Q9GZN6 736 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 ZNF395Q9H8N7 513 aaPredicted RBP14.49□□□□□ -0.09
SNIP1-202ENST00000468040 ACTR5Q9H9F9 607 aaPredicted RBP14.49□□□□□ -0.09
SNIP1-202ENST00000468040 TNFRSF12AQ9NP84 129 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 PFDN4Q9NQP4 134 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 STARD5Q9NSY2 213 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 ZDHHC2Q9UIJ5 367 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 FIS1Q9Y3D6 152 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 PCDHGA7Q9Y5G6 932 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 B3GALT1Q9Y5Z6 326 aa14.49□□□□□ -0.09
SNIP1-202ENST00000468040 KIF26BQ2KJY2 2108 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 MAGEB17A8MXT2 336 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 C9orf172C9J069 976 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 NVLO15381 856 aaKnown RBP14.48□□□□□ -0.09
SNIP1-202ENST00000468040 TGFB1P01137 390 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 PDYNP01213 254 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 STATHP02808 62 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 RPS13P62277 151 aaKnown RBP14.48□□□□□ -0.09
SNIP1-202ENST00000468040 SKP1P63208 163 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 HYAL2Q12891 473 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 CSTF3Q12996 717 aaKnown RBP14.48□□□□□ -0.09
SNIP1-202ENST00000468040 CUL3Q13618 768 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 FAM53BQ14153 422 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 ADPRMQ3LIE5 342 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 TOR1AIP1Q5JTV8 583 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 TCHHL1Q5QJ38 904 aaPredicted RBP14.48□□□□□ -0.09
SNIP1-202ENST00000468040 KHDRBS2Q5VWX1 349 aaKnown RBP14.48□□□□□ -0.09
SNIP1-202ENST00000468040 RHBDD2Q6NTF9 364 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 NIPAL1Q6NVV3 410 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 ATG14Q6ZNE5 492 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 CRLF3Q8IUI8 442 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 ARHGEF39Q8N4T4 335 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 KCT2Q8NC54 265 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 SRFBP1Q8NEF9 429 aaKnown RBP14.48□□□□□ -0.09
SNIP1-202ENST00000468040 PROKR1Q8TCW9 393 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 TWIST2Q8WVJ9 160 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 PMEPA1Q969W9 287 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 GAL3ST3Q96A11 431 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 MTFMTQ96DP5 389 aaKnown RBP14.48□□□□□ -0.09
SNIP1-202ENST00000468040 MVB12AQ96EY5 273 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 FAR2Q96K12 515 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 SERPINI1Q99574 410 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 CCT7Q99832 543 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 MACROD1Q9BQ69 325 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 ULBP3Q9BZM4 244 aa14.48□□□□□ -0.09
SNIP1-202ENST00000468040 REXO4Q9GZR2 422 aaKnown RBP14.48□□□□□ -0.09
SNIP1-202ENST00000468040 FARSBQ9NSD9 589 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms