RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 MND1Q9BWT6 205 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 NMUR2Q9GZQ4 415 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 RNF39Q9H2S5 420 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 FN3KQ9H479 309 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 INSL5Q9Y5Q6 135 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 CAPN8A6NHC0 703 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 FAM170BA6NMN3 283 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 ZNF99A8MXY4 864 aaPredicted RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 RAB36O95755 333 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 HLA-DQB2P05538 268 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 H1F0P07305 194 aaKnown RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 MSX1P28360 303 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 ERVK-8P63133 956 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 DSG2Q14126 1118 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 SIRPB2Q5JXA9 342 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 SH3PXD2AQ5TCZ1 1133 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 SPATC1Q76KD6 591 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 LYSMD3Q7Z3D4 306 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 CLNKQ7Z7G1 428 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 ZNF554Q86TJ5 538 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 FOXRED2Q8IWF2 684 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 ZNF709Q8N972 641 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 FAXDC2Q96IV6 333 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 ZNF350Q9GZX5 532 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 LAMP5Q9UJQ1 280 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 PPM1HQ9ULR3 514 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 GPR34Q9UPC5 381 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 CIB4A0PJX0 185 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 DISC1C4P0D8 188 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 BLOC1S5-TXNDC5H3BN57 136 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 J3QLW9 94 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 VNN2O95498 520 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 JUNP05412 331 aaKnown RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 CHRM5P08912 532 aaPredicted RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 ZNF35P13682 527 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 ZNF19P17023 458 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 FMO3P31513 532 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 SLC6A4P31645 630 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 RPS3AP61247 264 aaKnown RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 SEMA3AQ14563 771 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 FASTKD3Q14CZ7 662 aaKnown RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 ITPRIPL2Q3MIP1 535 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 OGFRL1Q5TC84 451 aaPredicted RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 ANKRD22Q5VYY1 191 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 CDCA2Q69YH5 1023 aaPredicted RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 PGM2L1Q6PCE3 622 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 ZNF366Q8N895 744 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 NFKBIDQ8NI38 313 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 SLC5A11Q8WWX8 675 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 FCRL5Q96RD9 977 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 ZNF700Q9H0M5 742 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 CCSER2Q9H7U1 834 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 KAT8Q9H7Z6 458 aaKnown RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 GKN1Q9NS71 199 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 TEX13DA0A0J9YY54 714 aaPredicted RBP8.44□□□□□ -1.06
HPS4-209ENST00000466781 H3BNX3 289 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 TBX18O95935 607 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 GJA5P36382 358 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 GALK2Q01415 458 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 PTP4A2Q12974 167 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 GRIK2Q13002 908 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 SYT16Q17RD7 645 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 DUOXA1Q1HG43 343 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 RBM15BQ8NDT2 890 aaKnown RBP8.44□□□□□ -1.06
HPS4-209ENST00000466781 NKD2Q969F2 451 aaPredicted RBP8.44□□□□□ -1.06
HPS4-209ENST00000466781 PYCR2Q96C36 320 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 KCTD7Q96MP8 289 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 SMG9Q9H0W8 520 aaKnown RBP8.44□□□□□ -1.06
HPS4-209ENST00000466781 GIN1Q9NXP7 522 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 FTSJ1Q9UET6 329 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 HCN2Q9UL51 889 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 POFUT2Q9Y2G5 429 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 BACE2Q9Y5Z0 518 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 GPR89AB7ZAQ6 455 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 NIPSNAP2O75323 286 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 GPR89BP0CG08 455 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 ATF6P18850 670 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 GJA8P48165 433 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 SLC3A1Q07837 685 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 ALG10BQ5I7T1 473 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 EGFLAMQ63HQ2 1017 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 OLFML1Q6UWY5 402 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 C1orf52Q8N6N3 182 aaKnown RBP8.44□□□□□ -1.06
HPS4-209ENST00000466781 ZNF283Q8N7M2 679 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 OR10Q1Q8NGQ4 319 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 TMCO6Q96DC7 493 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 IGSF21Q96ID5 467 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 HERC2P3Q9BVR0 1158 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 RMI1Q9H9A7 625 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 TRIM36Q9NQ86 728 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 PRTFDC1Q9NRG1 225 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 HPF1Q9NWY4 346 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 GRHL1Q9NZI5 618 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 ZFR2Q9UPR6 939 aaKnown RBP8.44□□□□□ -1.06
HPS4-209ENST00000466781 MYH1P12882 1939 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 SYPP08247 313 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 CDH1P12830 882 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 SLC6A6P31641 620 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 ST3GAL3Q11203 375 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 MPP2Q14168 576 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms