RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 KCNK10P57789 538 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 OR4D2P58180 307 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 MGAT5Q09328 741 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 PDIA2Q13087 525 aaKnown RBP16.53■□□□□ 0.24
COL7A1-206ENST00000466591 PWP1Q13610 501 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 MEP1AQ16819 746 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 SFT2D3Q587I9 215 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 FCRLBQ6BAA4 426 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 ZNF787Q6DD87 383 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 PAPD4Q6PIY7 484 aaKnown RBP16.53■□□□□ 0.24
COL7A1-206ENST00000466591 STRA8Q7Z7C7 330 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 IGDCC3Q8IVU1 814 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 NKAPQ8N5F7 415 aaKnown RBP16.53■□□□□ 0.24
COL7A1-206ENST00000466591 HORMAD2Q8N7B1 307 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 FBXL8Q96CD0 374 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 OR1F2PQ96R84 312 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 SLX1AQ9BQ83 275 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 UTP23Q9BRU9 249 aaKnown RBP16.53■□□□□ 0.24
COL7A1-206ENST00000466591 RNF32Q9H0A6 362 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 NSMCE4AQ9NXX6 385 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 SAR1BQ9Y6B6 198 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 SPTBN1Q01082 2364 aaKnown RBP16.53■□□□□ 0.24
COL7A1-206ENST00000466591 ICE1Q9Y2F5 2266 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 FAM95CA0A1B0GW59 222 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 NPEPPSL1A6NEC2 478 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 EFCAB8A8MWE9 144 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 FAM227AF5H4B4 570 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 CCDC188H7C350 402 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 TTI1O43156 1089 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 B4GALT2O60909 372 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 H2AFYO75367 372 aaKnown RBP16.52■□□□□ 0.24
COL7A1-206ENST00000466591 FHP07954 510 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 ZNF888P0CJ79 500 aaPredicted RBP16.52■□□□□ 0.24
COL7A1-206ENST00000466591 CD46P15529 392 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 ALOX12P18054 663 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 OLR1P78380 273 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 ZNF766Q5HY98 468 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 ACER2Q5QJU3 275 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 CATSPEREQ5SY80 951 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 TRMT10BQ6PF06 316 aaKnown RBP16.52■□□□□ 0.24
COL7A1-206ENST00000466591 CAPN12Q6ZSI9 719 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 FAM98AQ8NCA5 519 aaKnown RBP16.52■□□□□ 0.24
COL7A1-206ENST00000466591 ZNF740Q8NDX6 193 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 FBXO36Q8NEA4 188 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 ARMC2Q8NEN0 867 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 OR56A3Q8NH54 315 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 DNAJB8Q8NHS0 232 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 CCT6BQ92526 530 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 TBC1D20Q96BZ9 403 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 TM4SF19Q96DZ7 209 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 FAR2Q96K12 515 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 IMMP1LQ96LU5 166 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 PWWP2AQ96N64 755 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 NAPGQ99747 312 aaPredicted RBP16.52■□□□□ 0.24
COL7A1-206ENST00000466591 OLFM1Q99784 485 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 TRIM51Q9BSJ1 452 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 RHBGQ9H310 441 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 SH3BGRL2Q9UJC5 107 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 KCNE2Q9Y6J6 123 aa16.52■□□□□ 0.24
COL7A1-206ENST00000466591 SPTAN1Q13813 2472 aaKnown RBP16.52■□□□□ 0.23
COL7A1-206ENST00000466591 OR2W5A6NFC9 320 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 WIPF3A6NGB9 483 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 ZG16O60844 167 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 EEF1DP29692 281 aaKnown RBP16.51■□□□□ 0.23
COL7A1-206ENST00000466591 DCTP40126 519 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 PGGT1BP53609 377 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 TIAL1Q01085 375 aaKnown RBP eCLIP16.51■□□□□ 0.23
COL7A1-206ENST00000466591 THOC6Q86W42 341 aaKnown RBP16.51■□□□□ 0.23
COL7A1-206ENST00000466591 PDSS2Q86YH6 399 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 BEST3Q8N1M1 668 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 BBOF1Q8ND07 529 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 TRPV3Q8NET8 790 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 ABHD11Q8NFV4 315 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 OR5T3Q8NGG3 340 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 M1APQ8TC57 530 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 CDKL2Q92772 493 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 NEIL2Q969S2 332 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 RUBCNLQ9H714 662 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 KLHL1Q9NR64 748 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 ANKRD10Q9NXR5 420 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 CTNNAL1Q9UBT7 734 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 ZFP69BQ9UJL9 534 aa16.51■□□□□ 0.23
COL7A1-206ENST00000466591 MAGEB17A8MXT2 336 aa16.5■□□□□ 0.23
COL7A1-206ENST00000466591 CHST10O43529 356 aa16.5■□□□□ 0.23
COL7A1-206ENST00000466591 GALR3O60755 368 aaPredicted RBP16.5■□□□□ 0.23
COL7A1-206ENST00000466591 ZNF37AP17032 561 aaPredicted RBP16.5■□□□□ 0.23
COL7A1-206ENST00000466591 AHRP35869 848 aa16.5■□□□□ 0.23
COL7A1-206ENST00000466591 RAB8AP61006 207 aa16.5■□□□□ 0.23
COL7A1-206ENST00000466591 CALCOCO2Q13137 446 aa16.5■□□□□ 0.23
COL7A1-206ENST00000466591 ADAMTSL2Q86TH1 951 aa16.5■□□□□ 0.23
COL7A1-206ENST00000466591 ZBED8Q8IZ13 594 aa16.5■□□□□ 0.23
COL7A1-206ENST00000466591 TMEM178AQ8NBL3 297 aa16.5■□□□□ 0.23
COL7A1-206ENST00000466591 MAGED4Q96JG8 741 aa16.5■□□□□ 0.23
COL7A1-206ENST00000466591 PTCHD1Q96NR3 888 aa16.5■□□□□ 0.23
COL7A1-206ENST00000466591 TAAR6Q96RI8 345 aa16.5■□□□□ 0.23
COL7A1-206ENST00000466591 PELI2Q9HAT8 420 aa16.5■□□□□ 0.23
COL7A1-206ENST00000466591 GPAMQ9HCL2 828 aa16.5■□□□□ 0.23
COL7A1-206ENST00000466591 MMP25Q9NPA2 562 aa16.5■□□□□ 0.23
COL7A1-206ENST00000466591 COPG2Q9UBF2 871 aa16.5■□□□□ 0.23
COL7A1-206ENST00000466591 SLC22A14Q9Y267 594 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms