RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ATP6V1E1P36543 226 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 MAGEB1P43366 347 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 OR3A2P47893 321 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 CLCN4P51793 760 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 ADARP55265 1226 aaKnown RBP3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 DCDC1P59894 354 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 SLC3A1Q07837 685 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 AP1B1Q10567 949 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 CBX3Q13185 183 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 ACKR1Q16570 336 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 ALKBH5Q6P6C2 394 aaKnown RBP3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 DHRS11Q6UWP2 260 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 C15orf52Q6ZUT6 534 aaKnown RBP3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 CUZD1Q86UP6 607 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 TMEM178AQ8NBL3 297 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 MGARPQ8TDB4 240 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 MRGPRDQ8TDS7 321 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 GATAD1Q8WUU5 269 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 LGALS12Q96DT0 336 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 FBXO17Q96EF6 278 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 GAL3ST4Q96RP7 486 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 ZNF559Q9BR84 538 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 TDRD1Q9BXT4 1180 aaKnown RBP3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 TSPYL1Q9H0U9 437 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 P2RY12Q9H244 342 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 ZDHHC6Q9H6R6 413 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 SDF2L1Q9HCN8 221 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 HACD3Q9P035 362 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 HMG20BQ9P0W2 317 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 PPP2R2CQ9Y2T4 447 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 NSG2Q9Y328 171 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 SPAG9O60271 1321 aaKnown RBP3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 GPRASP1Q5JY77 1395 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 SMCHD1A6NHR9 2005 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 IFITM10A6NMD0 228 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 HHLA1C9JL84 531 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 H3BMM5 538 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 CLN5O75503 358 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 PRDM1O75626 825 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 LETM1O95202 739 aaPredicted RBP3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 MT-ND3P03897 115 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 SP1P08047 785 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 PATE4P0C8F1 98 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 GNB3P16520 340 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 OR1D5P58170 312 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 SP3Q02447 781 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 HNRNPA0Q13151 305 aaKnown RBP3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 GRB14Q14449 540 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 LASP1Q14847 261 aaKnown RBP3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 EFTUD2Q15029 972 aaKnown RBP eCLIP3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 PRAMEF8Q5VWM4 474 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 CD164L2Q6UWJ8 174 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 MEX3BQ6ZN04 569 aaKnown RBP3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 ASPGQ86U10 573 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 TMEM126BQ8IUX1 230 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 LACC1Q8IV20 430 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 LAX1Q8IWV1 398 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 CNTN4Q8IWV2 1026 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 CCDC185Q8N715 623 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 ARL10Q8N8L6 244 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 RTL3Q8N8U3 475 aaKnown RBP3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 RNF149Q8NC42 400 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 DDHD1Q8NEL9 900 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 OR5T2Q8NGG2 359 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 OR4D10Q8NGI6 311 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 FAM76AQ8TAV0 307 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 MAPK15Q8TD08 544 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 IL12RB2Q99665 862 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 PI4K2AQ9BTU6 479 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 ACPTQ9BZG2 426 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 NYXQ9GZU5 481 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 VIPAS39Q9H9C1 493 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 INTS10Q9NVR2 710 aaKnown RBP3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 CYP39A1Q9NYL5 469 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 MOSPD1Q9UJG1 213 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 NCKAP1Q9Y2A7 1128 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 WDR37Q9Y2I8 494 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 LRP12Q9Y561 859 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 COLEC10Q9Y6Z7 277 aa3.84□□□□□ -1.79
CDC42BPA-211ENST00000466538 A0A0A6YYC8 382 aaPredicted RBP3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 TRBV4-1A0A0J9YWV2 114 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 ERVV-2B6SEH9 535 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 I3L1I5 382 aaPredicted RBP3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 HTATSF1O43719 755 aaKnown RBP3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 SAP30O75446 220 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 MT-ND2P03891 347 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 P4HA1P13674 534 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 HLA-FP30511 346 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 MAP2K2P36507 400 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 LEPRP48357 1165 aaKnown RBP3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 UCP2P55851 309 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 GNB1P62873 340 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 CSNK2BP67870 215 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 FKBP1BP68106 108 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 TRA2AQ13595 282 aaKnown RBP eCLIP3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 ITGA9Q13797 1035 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 TAB1Q15750 504 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 DUSP5Q16690 384 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 ZNF876PQ49A33 203 aa3.83□□□□□ -1.8
CDC42BPA-211ENST00000466538 FFAR4Q5NUL3 377 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms