RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 WASH6PQ9NQA3 447 aa17.52■□□□□ 0.4
COL9A3-205ENST00000466192 EXO1Q9UQ84 846 aaKnown RBP17.52■□□□□ 0.4
COL9A3-205ENST00000466192 DLGAP1O14490 977 aa17.52■□□□□ 0.39
COL9A3-205ENST00000466192 TNFAIP8O95379 198 aa17.52■□□□□ 0.39
COL9A3-205ENST00000466192 GZMMP51124 257 aa17.52■□□□□ 0.39
COL9A3-205ENST00000466192 TXNL4AP83876 142 aaKnown RBP17.52■□□□□ 0.39
COL9A3-205ENST00000466192 SFSWAPQ12872 951 aaKnown RBP17.52■□□□□ 0.39
COL9A3-205ENST00000466192 DUOXA1Q1HG43 343 aa17.52■□□□□ 0.39
COL9A3-205ENST00000466192 LRIT3Q3SXY7 679 aa17.52■□□□□ 0.39
COL9A3-205ENST00000466192 ENPP7Q6UWV6 458 aa17.52■□□□□ 0.39
COL9A3-205ENST00000466192 CARM1Q86X55 608 aa17.52■□□□□ 0.39
COL9A3-205ENST00000466192 CLECL1Q8IZS7 167 aa17.52■□□□□ 0.39
COL9A3-205ENST00000466192 ABHD11Q8NFV4 315 aa17.52■□□□□ 0.39
COL9A3-205ENST00000466192 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.52■□□□□ 0.39
COL9A3-205ENST00000466192 HMGB4Q8WW32 186 aa17.52■□□□□ 0.39
COL9A3-205ENST00000466192 BDH2Q9BUT1 245 aa17.52■□□□□ 0.39
COL9A3-205ENST00000466192 PCBD2Q9H0N5 130 aa17.52■□□□□ 0.39
COL9A3-205ENST00000466192 FAM120CQ9NX05 1096 aaKnown RBP17.52■□□□□ 0.39
COL9A3-205ENST00000466192 SCHIP1Q9P0W5 487 aaPredicted RBP17.52■□□□□ 0.39
COL9A3-205ENST00000466192 EBF1Q9UH73 591 aa17.52■□□□□ 0.39
COL9A3-205ENST00000466192 NDRG2Q9UN36 371 aaKnown RBP17.52■□□□□ 0.39
COL9A3-205ENST00000466192 LRP4O75096 1905 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 FAM220BPB1ANY3 271 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 H7BY64 318 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 CLOCKO15516 846 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 KLHL18O94889 574 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 RASAL1O95294 804 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 PGM3O95394 542 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 CPSF4O95639 269 aaKnown RBP17.51■□□□□ 0.39
COL9A3-205ENST00000466192 TBX6O95947 436 aaPredicted RBP17.51■□□□□ 0.39
COL9A3-205ENST00000466192 ZNF23P17027 643 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 RAB28P51157 221 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 HNRNPFP52597 415 aaKnown RBP17.51■□□□□ 0.39
COL9A3-205ENST00000466192 NFATC4Q14934 902 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 Q6ZS52 159 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 ZNF621Q6ZSS3 439 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 SPRED1Q7Z699 444 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 METTL4Q8N3J2 472 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 ANKRD53Q8N9V6 530 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 STARD8Q92502 1023 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 PRAP1Q96NZ9 151 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 OR2M4Q96R27 311 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 PRPF18Q99633 342 aaKnown RBP17.51■□□□□ 0.39
COL9A3-205ENST00000466192 PHF7Q9BWX1 381 aaPredicted RBP17.51■□□□□ 0.39
COL9A3-205ENST00000466192 UGT2B28Q9BY64 529 aa17.51■□□□□ 0.39
COL9A3-205ENST00000466192 UBE2ZQ9H832 354 aaPredicted RBP17.51■□□□□ 0.39
COL9A3-205ENST00000466192 ARHGEF17Q96PE2 2063 aaPredicted RBP17.51■□□□□ 0.39
COL9A3-205ENST00000466192 PLOD2O00469 737 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 CREG1O75629 220 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 SCELO95171 688 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 SMIM18P0DKX4 95 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 NELFEP18615 380 aaKnown RBP17.5■□□□□ 0.39
COL9A3-205ENST00000466192 HNRNPA2B1P22626 353 aaKnown RBP17.5■□□□□ 0.39
COL9A3-205ENST00000466192 TRPC1P48995 793 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 PHEXP78562 749 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 CTBSQ01459 385 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 ZNF763Q0D2J5 394 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 MAP7Q14244 749 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 TCEA2Q15560 299 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 CCDC85BQ15834 202 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-205ENST00000466192 RPE65Q16518 533 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 NKG7Q16617 165 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 CPTPQ5TA50 214 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 ZNF551Q7Z340 670 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-205ENST00000466192 GALNT15Q8N3T1 639 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 MFSD2AQ8NA29 543 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 NETO1Q8TDF5 533 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 TFAP2CQ92754 450 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 AIF1LQ9BQI0 150 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 DUSP26Q9BV47 211 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 RHBGQ9H310 441 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 LRRC72A6NJI9 287 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 EVPLLA8MZ36 301 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 CLIC1O00299 241 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 PRKD3O94806 890 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 PTX3P26022 381 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-205ENST00000466192 CCR8P51685 355 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 KRT33BQ14525 404 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 KRT80Q6KB66 452 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 TMEM214Q6NUQ4 689 aaKnown RBP17.5■□□□□ 0.39
COL9A3-205ENST00000466192 CAMKMTQ7Z624 323 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 RAB42Q8N4Z0 105 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 OR4K1Q8NGD4 311 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 OR52E1Q8NGJ3 308 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 MAGEE2Q8TD90 523 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-205ENST00000466192 UTS2RQ9UKP6 389 aa17.5■□□□□ 0.39
COL9A3-205ENST00000466192 PNMA8BQ9ULN7 279 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-205ENST00000466192 MDC1Q14676 2089 aaKnown RBP17.49■□□□□ 0.39
COL9A3-205ENST00000466192 TMEM265A0A087WTH1 108 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 FEZF1A0PJY2 475 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 EML2O95834 649 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 ENGP17813 658 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 PKLRP30613 574 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 HPCAL1P37235 193 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 REEP5Q00765 189 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 ABHD18Q0P651 414 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 TBPL2Q6SJ96 375 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 RD3Q7Z3Z2 195 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 OR2A1Q8NGT9 310 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 SNX19Q92543 992 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms