RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 COG4Q9H9E3 785 aa9.05□□□□□ -0.96
ATG3-203ENST00000465980 PDE7BQ9NP56 450 aa9.05□□□□□ -0.96
ATG3-203ENST00000465980 ADAMTS6Q9UKP5 1117 aa9.05□□□□□ -0.96
ATG3-203ENST00000465980 TRIM33Q9UPN9 1127 aa9.05□□□□□ -0.96
ATG3-203ENST00000465980 DOCK10Q96BY6 2186 aa9.05□□□□□ -0.96
ATG3-203ENST00000465980 SVILO95425 2214 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 ESPL1Q14674 2120 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 PIPSLA2A3N6 862 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 TMEM114B3SHH9 223 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 SUPT3HB4E1H0 165 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 GFYI3L273 518 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 UBXN8O00124 270 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 SUV39H1O43463 412 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 NPHS1O60500 1241 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 EDF1O60869 148 aaKnown RBP9.04□□□□□ -0.96
ATG3-203ENST00000465980 SNNO75324 88 aaPredicted RBP9.04□□□□□ -0.96
ATG3-203ENST00000465980 SUPT3HO75486 399 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 WISP1O95388 367 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 MATN4O95460 622 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 IMPDH1P20839 514 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 DRD4P21917 467 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 CDH3P22223 829 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 PDHA2P29803 388 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 RPS18P62269 152 aaKnown RBP9.04□□□□□ -0.96
ATG3-203ENST00000465980 HSD11B2P80365 405 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 ACY1Q03154 408 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 RPA4Q13156 261 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 PRKG2Q13237 762 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 SP140Q13342 867 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 DNASE1L3Q13609 305 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 TGFBIQ15582 683 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.04□□□□□ -0.96
ATG3-203ENST00000465980 CDKL4Q5MAI5 379 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 CES4AQ5XG92 561 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 CYB5D1Q6P9G0 228 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 FAM199XQ6PEV8 388 aaPredicted RBP9.04□□□□□ -0.96
ATG3-203ENST00000465980 ZCCHC23Q6ZST2 131 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 FAM47EQ6ZV65 393 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 UBE2R2Q712K3 238 aaPredicted RBP9.04□□□□□ -0.96
ATG3-203ENST00000465980 CPLX4Q7Z7G2 160 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 PTGR2Q8N8N7 351 aaPredicted RBP9.04□□□□□ -0.96
ATG3-203ENST00000465980 C9orf43Q8TAL5 461 aaPredicted RBP9.04□□□□□ -0.96
ATG3-203ENST00000465980 APOBEC4Q8WW27 367 aaKnown RBP9.04□□□□□ -0.96
ATG3-203ENST00000465980 LCN9Q8WX39 176 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 ASB11Q8WXH4 323 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 L3HYPDHQ96EM0 354 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 C7orf26Q96N11 449 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 FERD3LQ96RJ6 166 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 CD180Q99467 661 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 PITPNM3Q9BZ71 974 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 TWSG1Q9GZX9 223 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 NSRP1Q9H0G5 558 aaKnown RBP9.04□□□□□ -0.96
ATG3-203ENST00000465980 KLHL25Q9H0H3 589 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 SRMSQ9H3Y6 488 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 XKR8Q9H6D3 395 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 AKIRIN1Q9H9L7 192 aaPredicted RBP9.04□□□□□ -0.96
ATG3-203ENST00000465980 SLCO1B3Q9NPD5 702 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 THAP1Q9NVV9 213 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 NUDT4Q9NZJ9 180 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 PADI1Q9ULC6 663 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 OARD1Q9Y530 152 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 COLEC10Q9Y6Z7 277 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 HEATR5BQ9P2D3 2071 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 HIVEP3Q5T1R4 2406 aa9.04□□□□□ -0.96
ATG3-203ENST00000465980 CENPEQ02224 2701 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 SLC9B1P1A6NJY1 282 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 STX16-NPEPL1H3BU86 382 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 IFRD1O00458 451 aaPredicted RBP9.03□□□□□ -0.96
ATG3-203ENST00000465980 STX16O14662 325 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 PSIP1O75475 530 aaKnown RBP9.03□□□□□ -0.96
ATG3-203ENST00000465980 SCRG1O75711 98 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 ZBTB11O95625 1053 aaPredicted RBP9.03□□□□□ -0.96
ATG3-203ENST00000465980 FAM107AO95990 144 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 S100BP04271 92 aaPredicted RBP9.03□□□□□ -0.96
ATG3-203ENST00000465980 GFAPP14136 432 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 CYP2A7P20853 494 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 NDUFS1P28331 727 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 SERPINB5P36952 375 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 SLC1A6P48664 564 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 NAGLUP54802 743 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 ALDH18A1P54886 795 aaKnown RBP9.03□□□□□ -0.96
ATG3-203ENST00000465980 ABCE1P61221 599 aaKnown RBP9.03□□□□□ -0.96
ATG3-203ENST00000465980 NAA20P61599 178 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 HERVK_113P63132 956 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 CDKL1Q00532 357 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 OCRLQ01968 901 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 TLE1Q04724 770 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 PRKAA1Q13131 559 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 PHKG1Q16816 387 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 ZNF678Q5SXM1 525 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 PRAMEF17Q5VTA0 474 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 CAPRIN2Q6IMN6 1127 aaKnown RBP9.03□□□□□ -0.96
ATG3-203ENST00000465980 FRA10AC1Q70Z53 315 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 TRIM73Q86UV7 250 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 KMT5CQ86Y97 462 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 TMEM126BQ8IUX1 230 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 D2HGDHQ8N465 521 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 PDPRQ8NCN5 879 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 FBXO15Q8NCQ5 510 aaPredicted RBP9.03□□□□□ -0.96
ATG3-203ENST00000465980 BCAS4Q8TDM0 211 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms