RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 NUDT21O43809 227 aaKnown RBP13.29□□□□□ -0.28
HDAC6-215ENST00000465457 KRT34O76011 436 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 CLDN9O95484 217 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 CLDN1O95832 211 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 CAPN1P07384 714 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 SNRPB2P08579 225 aaKnown RBP13.29□□□□□ -0.28
HDAC6-215ENST00000465457 LINC00032P0C843 101 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 CCND1P24385 295 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 ALDH4A1P30038 563 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 NUDT2P50583 147 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 ART3Q13508 389 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 RPS6KA2Q15349 733 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 ZNF658BQ4V348 819 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-215ENST00000465457 ATP6AP1LQ52LC2 224 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 LETMD1Q6P1Q0 360 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 UNC5DQ6UXZ4 953 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 HACD2Q6Y1H2 254 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 TIPARPQ7Z3E1 657 aaKnown RBP13.29□□□□□ -0.28
HDAC6-215ENST00000465457 GALNT13Q8IUC8 556 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 PGAM4Q8N0Y7 254 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 OR52B6Q8NGF0 335 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 OR2L2Q8NH16 312 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 NAT14Q8WUY8 206 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 APOBEC4Q8WW27 367 aaKnown RBP13.29□□□□□ -0.28
HDAC6-215ENST00000465457 STARD8Q92502 1023 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 STMN2Q93045 179 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 C3orf30Q96M34 536 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 KCNA7Q96RP8 456 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 CTRCQ99895 268 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 TUBB1Q9H4B7 451 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 RMI1Q9H9A7 625 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 DNAJC11Q9NVH1 559 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 BCAP29Q9UHQ4 241 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 ZNF225Q9UK10 706 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 SNX6Q9UNH7 406 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 ASB1Q9Y576 335 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 DGKBQ9Y6T7 804 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 CELSR1Q9NYQ6 3014 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 CSMD2Q7Z408 3487 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 ADGRG4Q8IZF6 3080 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 ATP6AP2A0A1C7CYW4 349 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 TOR1BO14657 336 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 CHUKO15111 745 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 KCNJ13O60928 360 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 ATP6AP2O75787 350 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 RPN2P04844 631 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 FURINP09958 794 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 ITGAXP20702 1163 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 HTR1BP28222 390 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 CD1CP29017 333 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 HNRNPH1P31943 449 aaKnown RBP13.28□□□□□ -0.28
HDAC6-215ENST00000465457 PNLIPRP1P54315 467 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 CDK3Q00526 305 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 PCDH1Q08174 1060 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 PDCD4Q53EL6 469 aaKnown RBP13.28□□□□□ -0.28
HDAC6-215ENST00000465457 C10orf62Q5T681 223 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-215ENST00000465457 ZNF438Q7Z4V0 828 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 LRRTM4Q86VH4 590 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 FAM129CQ86XR2 697 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 VRK3Q8IV63 474 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 FAM9CQ8IZT9 166 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 BEND7Q8N7W2 519 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-215ENST00000465457 BMPERQ8N8U9 685 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 SNX31Q8N9S9 440 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 L3MBTL4Q8NA19 623 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 PCYOX1LQ8NBM8 494 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 JADE3Q92613 823 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 THTPAQ9BU02 230 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 DDA1Q9BW61 102 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 TEX101Q9BY14 249 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 BRINP2Q9C0B6 783 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 ZNF768Q9H5H4 540 aaKnown RBP13.28□□□□□ -0.28
HDAC6-215ENST00000465457 WDR26Q9H7D7 661 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 ACTR8Q9H981 624 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 PHPT1Q9NRX4 125 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-215ENST00000465457 AIG1Q9NVV5 245 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 SLC39A1Q9NY26 324 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 ZIM2Q9NZV7 527 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 ATXN10Q9UBB4 475 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 G3BP2Q9UN86 482 aaKnown RBP13.28□□□□□ -0.28
HDAC6-215ENST00000465457 BTRCQ9Y297 605 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 TIMM22Q9Y584 194 aa13.28□□□□□ -0.28
HDAC6-215ENST00000465457 SERTM1A2A2V5 107 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 EFCAB7A8K855 629 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 ARHGEF33A8MVX0 844 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 IFRD1O00458 451 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-215ENST00000465457 KMOO15229 486 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 ULK1O75385 1050 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 TNFP01375 233 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 GPX3P22352 226 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 F8A1P23610 371 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 PRDX3P30048 256 aaKnown RBP13.27□□□□□ -0.29
HDAC6-215ENST00000465457 SLC25A3Q00325 362 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 EMX2Q04743 252 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 TBL3Q12788 808 aaKnown RBP13.27□□□□□ -0.29
HDAC6-215ENST00000465457 MMEL1Q495T6 779 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 AGKQ53H12 422 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 FBXO48Q5FWF7 155 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 LIPJQ5W064 366 aa13.27□□□□□ -0.29
HDAC6-215ENST00000465457 PRMT9Q6P2P2 845 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms