RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 MS4A8Q9BY19 250 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 CHRNA10Q9GZZ6 450 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 APOBEC2Q9Y235 224 aaKnown RBP12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 LSM1O15116 133 aaKnown RBP12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 CTSBP07858 339 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 GABRA4P48169 554 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 ATP6AP1LQ52LC2 224 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 CEP70Q8NHQ1 597 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 N4BP2L2Q92802 583 aaPredicted RBP12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 F2RL3Q96RI0 385 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 MRPL1Q9BYD6 325 aaKnown RBP12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 PLCL2Q9UPR0 1127 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 PCDHGA1Q9Y5H4 931 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 SERPINA6P08185 405 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 SLC35G6P0C7Q6 338 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 FOLR1P15328 257 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 ZFP36L1Q07352 338 aaKnown RBP12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 COL9A2Q14055 689 aaPredicted RBP12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 AP5B1Q2VPB7 878 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 TMTC4Q5T4D3 741 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 RBM44Q6ZP01 1051 aaKnown RBP12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 CHSY3Q70JA7 882 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 DGLUCYQ7Z3D6 616 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 ACTRT2Q8TDY3 377 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 TM4SF19Q96DZ7 209 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 SERPINI1Q99574 410 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 STARD5Q9NSY2 213 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 PPT2Q9UMR5 302 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 LRIT2A6NDA9 550 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 E9PBE3 544 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 P2RX6O15547 441 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 KLHL41O60662 606 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 SRPX2O60687 465 aaPredicted RBP12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 VPS4BO75351 444 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 SEC22BO75396 215 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 RSL1D1O76021 490 aaKnown RBP12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 HNRNPH1P31943 449 aaKnown RBP12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 PDX1P52945 283 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 CLDN6P56747 220 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 INSM1Q01101 510 aaPredicted RBP12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 HYAL2Q12891 473 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 PWP1Q13610 501 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 GPR19Q15760 415 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 HKDC1Q2TB90 917 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 RFTN2Q52LD8 501 aaPredicted RBP12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 C6orf136Q5SQH8 315 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 WASHC2DQ5SRD0 308 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 DEPDC1Q5TB30 811 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 KHDRBS2Q5VWX1 349 aaKnown RBP12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 DHRS13Q6UX07 377 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 SLCO6A1Q86UG4 719 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 CSNK1A1LQ8N752 337 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 KCT2Q8NC54 265 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 CAMKVQ8NCB2 501 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 APIPQ96GX9 242 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 PPP3R2Q96LZ3 170 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 REXO4Q9GZR2 422 aaKnown RBP12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 AICDAQ9GZX7 198 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 KLHL31Q9H511 634 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 LRTM1Q9HBL6 345 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 NMRK1Q9NWW6 199 aa12.18□□□□□ -0.46
SUPT20H-204ENST00000464572 SPAARA0A1B0GVQ0 90 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 TM4SF5O14894 197 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 SPTBP11277 2137 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 RGS1Q08116 209 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 TUBB3Q13509 450 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 TMEM198Q66K66 360 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 FNDC5Q8NAU1 212 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 IRAK4Q9NWZ3 460 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 C1orf109Q9NX04 203 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 LBPP18428 481 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 CSRP1P21291 193 aaKnown RBP12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 RPL38P63173 70 aaKnown RBP12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 TBL3Q12788 808 aaKnown RBP12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 TRA2AQ13595 282 aaKnown RBP eCLIP12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 CUL3Q13618 768 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 TOR1AIP1Q5JTV8 583 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 ALYREFQ86V81 257 aaKnown RBP12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 ZNF655Q8N720 491 aaPredicted RBP12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 NT5CQ8TCD5 201 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 TMEM74Q96NL1 305 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 CENPKQ9BS16 269 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 CCDC28BQ9BUN5 200 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 SLC6A16Q9GZN6 736 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 G3BP2Q9UN86 482 aaKnown RBP12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 ARL2BPQ9Y2Y0 163 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 TMEM150CB9EJG8 249 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 PRR35P0CG20 571 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 CSTF2P33240 577 aaKnown RBP eCLIP12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 RAP1GDS1P52306 607 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 PLA2G16P53816 162 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 SIM1P81133 766 aaPredicted RBP12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 ACSM2AQ08AH3 577 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 C16orf72Q14CZ0 275 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 ADPRMQ3LIE5 342 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 ACSM2BQ68CK6 577 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 C1orf52Q8N6N3 182 aaKnown RBP12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 CCDC197Q8NCU1 140 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 MS4A6EQ96DS6 147 aa12.17□□□□□ -0.46
SUPT20H-204ENST00000464572 C1orf50Q9BV19 199 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms