RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 AKIRIN1Q9H9L7 192 aaPredicted RBP11.23□□□□□ -0.61
CPNE1-221ENST00000462352 MLXIPLQ9NP71 852 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 LHX9Q9NQ69 397 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 TXLNGQ9NUQ3 528 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 NDOR1Q9UHB4 597 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 TRPS1Q9UHF7 1281 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 STK38LQ9Y2H1 464 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 MRPS2Q9Y399 296 aaKnown RBP11.23□□□□□ -0.61
CPNE1-221ENST00000462352 PCDHGA11Q9Y5H2 935 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 FRYQ5TBA9 3013 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 A0A1B0GX78 115 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 WDR91A4D1P6 747 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 UBFD1O14562 309 aaKnown RBP11.22□□□□□ -0.61
CPNE1-221ENST00000462352 FFAR3O14843 346 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 BIRC5O15392 142 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 GPR42O15529 346 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 CLEC3AO75596 197 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 TBX6O95947 436 aaPredicted RBP11.22□□□□□ -0.61
CPNE1-221ENST00000462352 APC2O95996 2303 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 KLK3P07288 261 aaPredicted RBP11.22□□□□□ -0.61
CPNE1-221ENST00000462352 SERPINA6P08185 405 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 CCNYL3P0C7X3 344 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 SERPINB1P30740 379 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 HPDP32754 393 aaPredicted RBP11.22□□□□□ -0.61
CPNE1-221ENST00000462352 PKNOX1P55347 436 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 WDR4P57081 412 aaKnown RBP11.22□□□□□ -0.61
CPNE1-221ENST00000462352 TGIF1Q15583 401 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 NDUFA9Q16795 377 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 FREM2Q5SZK8 3169 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 HHATQ5VTY9 493 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 FAM219BQ5XKK7 198 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 FAM199XQ6PEV8 388 aaPredicted RBP11.22□□□□□ -0.61
CPNE1-221ENST00000462352 ZCCHC23Q6ZST2 131 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 GPRIN3Q6ZVF9 776 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 CACNA2D3Q8IZS8 1091 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 METTL27Q8N6F8 245 aaPredicted RBP11.22□□□□□ -0.61
CPNE1-221ENST00000462352 ZNF248Q8NDW4 579 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 OR6Y1Q8NGX8 325 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 ZCCHC10Q8TBK6 192 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 WDR20Q8TBZ3 569 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 MGARPQ8TDB4 240 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 AGAP11Q8TF27 550 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 ZNF473Q8WTR7 871 aaKnown RBP11.22□□□□□ -0.61
CPNE1-221ENST00000462352 KCNE4Q8WWG9 221 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 ZCCHC14Q8WYQ9 949 aaKnown RBP11.22□□□□□ -0.61
CPNE1-221ENST00000462352 NKD1Q969G9 470 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 REPS1Q96D71 796 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 NAF1Q96HR8 494 aaKnown RBP11.22□□□□□ -0.61
CPNE1-221ENST00000462352 CNDP1Q96KN2 507 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 PAIP2Q9BPZ3 127 aaKnown RBP11.22□□□□□ -0.61
CPNE1-221ENST00000462352 SLC6A16Q9GZN6 736 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 AICDAQ9GZX7 198 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 MID1IP1Q9NPA3 183 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 NKIRAS1Q9NYS0 192 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 ADGRE2Q9UHX3 823 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 PADI1Q9ULC6 663 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 TSC22D4Q9Y3Q8 395 aa11.22□□□□□ -0.61
CPNE1-221ENST00000462352 TMEM8BA6NDV4 472 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 URADA6NGE7 173 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 ATP8B1O43520 1251 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 FOXS1O43638 330 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 NPHS1O60500 1241 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 ESRRBO95718 433 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 CAPN1P07384 714 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 IL1RNP18510 177 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 ITGAXP20702 1163 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 HNRNPH1P31943 449 aaKnown RBP11.21□□□□□ -0.61
CPNE1-221ENST00000462352 STAT5AP42229 794 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 PIK3CBP42338 1070 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 ATP1A2P50993 1020 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 STXBP1P61764 594 aaKnown RBP11.21□□□□□ -0.61
CPNE1-221ENST00000462352 DCDP81605 110 aaKnown RBP11.21□□□□□ -0.61
CPNE1-221ENST00000462352 ABHD18Q0P651 414 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 CLN3Q13286 438 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 DDX39BQ13838 428 aaKnown RBP11.21□□□□□ -0.61
CPNE1-221ENST00000462352 FAM53BQ14153 422 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 ADPRMQ3LIE5 342 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 TOR1AIP1Q5JTV8 583 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 FRG2Q64ET8 278 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 TTC19Q6DKK2 380 aaPredicted RBP11.21□□□□□ -0.61
CPNE1-221ENST00000462352 LCN10Q6JVE6 187 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 ZNF517Q6ZMY9 492 aaPredicted RBP11.21□□□□□ -0.61
CPNE1-221ENST00000462352 PRSS41Q7RTY9 318 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 PROSER1Q86XN7 944 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 RNF175Q8N4F7 328 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 IL22RA1Q8N6P7 574 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 CDYL2Q8N8U2 506 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 HUS1BQ8NHY5 278 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 PPP1R14CQ8TAE6 165 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 METTL6Q8TCB7 284 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 MR1Q95460 341 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 MVB12AQ96EY5 273 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 FRG2BQ96QU4 278 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 MTERF1Q99551 399 aaKnown RBP11.21□□□□□ -0.61
CPNE1-221ENST00000462352 DPH2Q9BQC3 489 aaPredicted RBP11.21□□□□□ -0.61
CPNE1-221ENST00000462352 TRMOQ9BU70 441 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 MS4A8Q9BY19 250 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 SHCBP1LQ9BZQ2 653 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 KLHL31Q9H511 634 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 PRM3Q9NNZ6 103 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms