RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 HDAC2Q92769 488 aaKnown RBP4.72□□□□□ -1.65
COPS3-204ENST00000462236 ZUFSPQ96AP4 578 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 EME1Q96AY2 570 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 TMEM159Q96B96 161 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 SLC45A3Q96JT2 553 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 CATSPER2Q96P56 530 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 IL12RB2Q99665 862 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 PRMT1Q99873 361 aaKnown RBP4.72□□□□□ -1.65
COPS3-204ENST00000462236 LRRC61Q9BV99 259 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 TNMDQ9H2S6 317 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 LRRN3Q9H3W5 708 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 CNGB3Q9NQW8 809 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 TRNAU1APQ9NX07 287 aaKnown RBP4.72□□□□□ -1.65
COPS3-204ENST00000462236 NLKQ9UBE8 527 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 PISDQ9UG56 409 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 XPO7Q9UIA9 1087 aaKnown RBP4.72□□□□□ -1.65
COPS3-204ENST00000462236 HS3ST2Q9Y278 367 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 LOXL2Q9Y4K0 774 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 TLN2Q9Y4G6 2542 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 DNAJC13O75165 2243 aa4.72□□□□□ -1.65
COPS3-204ENST00000462236 NSD1Q96L73 2696 aaPredicted RBP4.71□□□□□ -1.65
COPS3-204ENST00000462236 EBAG9O00559 213 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 ZNF821O75541 412 aaPredicted RBP4.71□□□□□ -1.66
COPS3-204ENST00000462236 MOCS3O95396 460 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 ENO3P13929 434 aaPredicted RBP4.71□□□□□ -1.66
COPS3-204ENST00000462236 LIFP15018 202 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 PSMA4P25789 261 aaKnown RBP4.71□□□□□ -1.66
COPS3-204ENST00000462236 GJB2P29033 226 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 PTPN9P43378 593 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 ARSFP54793 590 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 ENPEPQ07075 957 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 ADIGQ0VDE8 80 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 BST2Q10589 180 aaKnown RBP4.71□□□□□ -1.66
COPS3-204ENST00000462236 KLRB1Q12918 225 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 CDH18Q13634 790 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 RBMS2Q15434 407 aaKnown RBP4.71□□□□□ -1.66
COPS3-204ENST00000462236 KNOP1Q1ED39 458 aaKnown RBP4.71□□□□□ -1.66
COPS3-204ENST00000462236 ATG9BQ674R7 924 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 KIAA1161Q6NSJ0 714 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 TMEM81Q6P7N7 255 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 SHC4Q6S5L8 630 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 ERN2Q76MJ5 926 aaKnown RBP4.71□□□□□ -1.66
COPS3-204ENST00000462236 PTAR1Q7Z6K3 402 aaPredicted RBP4.71□□□□□ -1.66
COPS3-204ENST00000462236 ZSCAN30Q86W11 494 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 NELFCDQ8IXH7 590 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 MMP21Q8N119 569 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 NANOGP1Q8N7R0 232 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 OR2A12Q8NGT7 310 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 TMEM163Q8TC26 289 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 LMX1AQ8TE12 382 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 TAS1R2Q8TE23 839 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 RNF139Q8WU17 664 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 SLC35F5Q8WV83 523 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 IRGQQ8WZA9 623 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 CENPTQ96BT3 561 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 PPP1R13BQ96KQ4 1090 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 GFM1Q96RP9 751 aaKnown RBP4.71□□□□□ -1.66
COPS3-204ENST00000462236 DDX50Q9BQ39 737 aaKnown RBP4.71□□□□□ -1.66
COPS3-204ENST00000462236 SLC17A9Q9BYT1 436 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 STRADBQ9C0K7 418 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 EPB41L5Q9HCM4 733 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 ZNF71Q9NQZ8 489 aaPredicted RBP4.71□□□□□ -1.66
COPS3-204ENST00000462236 IRAK4Q9NWZ3 460 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 TAS2R10Q9NYW0 307 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 KIAA1456Q9P272 454 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 SPASTQ9UBP0 616 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 APPL1Q9UKG1 709 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 PCDHGB5Q9Y5G0 923 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 FADS3Q9Y5Q0 445 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 CLIC4Q9Y696 253 aa4.71□□□□□ -1.66
COPS3-204ENST00000462236 VPS13CQ709C8 3753 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 FN1P02751 2386 aaKnown RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 FLNAP21333 2647 aaKnown RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 A0A087X0M5 115 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 A0A0A0MQY5 61 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 A0A1B0GX30 115 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 TYW5A2RUC4 315 aaKnown RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 VPS37CA5D8V6 355 aaPredicted RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 TTC36A6NLP5 189 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 STMND1H3BQB6 276 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 K7EM74 188 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 O00370 1275 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 ADAM10O14672 748 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 DUX1O43812 170 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 KLRC4O43908 158 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 PAK4O96013 591 aaPredicted RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 RPLP0P05388 317 aaKnown RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 KRT7P08729 469 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 SRCP12931 536 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 ATP1A3P13637 1013 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 PDGFRAP16234 1089 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 TRIM21P19474 475 aaKnown RBP4.7□□□□□ -1.66
COPS3-204ENST00000462236 GNLYP22749 145 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 CHRNA3P32297 505 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 TNFSF8P32971 234 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 UGT1A3P35503 534 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 NNMTP40261 264 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 PIK3CAP42336 1068 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 GABRB2P47870 512 aa4.7□□□□□ -1.66
COPS3-204ENST00000462236 MLLT10P55197 1068 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms