RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 AREL1O15033 823 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 TULP3O75386 442 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 RASAL1O95294 804 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 ADH5P11766 374 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 DGKEP52429 567 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 RPS13P62277 151 aaKnown RBP14.86□□□□□ -0.03
LMNB1-203ENST00000460265 COQ5Q5HYK3 327 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 DESI1Q6ICB0 168 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 VTCN1Q7Z7D3 282 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 CRIPAKQ8N1N5 446 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 MAL2Q969L2 176 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 AMBNQ9NP70 447 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 MAP4K5Q9Y4K4 846 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 UNC80Q8N2C7 3258 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 A8MV72 311 aaPredicted RBP14.86□□□□□ -0.03
LMNB1-203ENST00000460265 SCO2O43819 266 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 EFCAB14O75071 495 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 NAT2P11245 290 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 TIMP2P16035 220 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 EPORP19235 508 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 CD40LGP29965 261 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 PON2Q15165 354 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 ATP6AP1Q15904 470 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 SPDYE7PQ495Y7 208 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 GTF2IRD2BQ6EKJ0 949 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 RD3Q7Z3Z2 195 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 GTF2IRD2Q86UP8 949 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 GALNT12Q8IXK2 581 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 FAM9CQ8IZT9 166 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 TCAIMQ8N3R3 496 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 MUC13Q9H3R2 512 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 UGT2B11O75310 529 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 CBSLP0DN79 551 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 LAMP1P11279 417 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 CEBPBP17676 345 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 CBSP35520 551 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 HNMTP50135 292 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 VBP1P61758 197 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 ZNF805Q5CZA5 627 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 TTC23Q5W5X9 447 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 LRRC70Q7Z2Q7 622 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 TMC8Q8IU68 726 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 PLD3Q8IV08 490 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 CCDC28AQ8IWP9 274 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 SPARTQ8N0X7 666 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 CADM2Q8N3J6 435 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 RASGEF1AQ8N9B8 481 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 ZSCAN5AQ9BUG6 496 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 DUSP26Q9BV47 211 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 NTMT1Q9BV86 223 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 C1QTNF3Q9BXJ4 246 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 BRWD1Q9NSI6 2320 aa14.86□□□□□ -0.03
LMNB1-203ENST00000460265 PATJQ8NI35 1801 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 GREM1O60565 184 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 ERN1O75460 977 aaKnown RBP14.85□□□□□ -0.03
LMNB1-203ENST00000460265 POP7O75817 140 aaKnown RBP14.85□□□□□ -0.03
LMNB1-203ENST00000460265 GGT1P19440 569 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 SLC6A11P48066 632 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 PPP2R2BQ00005 443 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 C2orf80Q0P641 193 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 USP39Q53GS9 565 aaKnown RBP14.85□□□□□ -0.03
LMNB1-203ENST00000460265 CATSPEREQ5SY80 951 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 XAF1Q6GPH4 301 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 CAPN13Q6MZZ7 669 aaPredicted RBP14.85□□□□□ -0.03
LMNB1-203ENST00000460265 NDNFQ8TB73 568 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 UTP15Q8TED0 518 aaKnown RBP14.85□□□□□ -0.03
LMNB1-203ENST00000460265 REXO5Q96IC2 774 aaKnown RBP14.85□□□□□ -0.03
LMNB1-203ENST00000460265 SP140LQ9H930 580 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 PDP1Q9P0J1 537 aaPredicted RBP14.85□□□□□ -0.03
LMNB1-203ENST00000460265 DNAJB9Q9UBS3 223 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 C3orf18Q9UK00 162 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 CHD5Q8TDI0 1954 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 NDUFS2O75306 463 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 INMTO95050 263 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 SCELO95171 688 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 APOA1P02647 267 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 PCCBP05166 539 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 JUNBP17275 347 aaPredicted RBP14.85□□□□□ -0.03
LMNB1-203ENST00000460265 ALOX12P18054 663 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 PPP5CP53041 499 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 AP1S2P56377 157 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 SLBPQ14493 270 aaKnown RBP eCLIP14.85□□□□□ -0.03
LMNB1-203ENST00000460265 ZDHHC20Q5W0Z9 365 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 TMEM215Q68D42 235 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 OR4A15Q8NGL6 344 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 BTN2A2Q8WVV5 523 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 TIFAQ96CG3 184 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 STOML2Q9UJZ1 356 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 CDK2AP1O14519 115 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 LATO43561 262 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 MITFO75030 526 aaPredicted RBP14.85□□□□□ -0.03
LMNB1-203ENST00000460265 ADH1CP00326 375 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 PRR35P0CG20 571 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 POU2F1P14859 743 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 IDH2P48735 452 aaKnown RBP14.85□□□□□ -0.03
LMNB1-203ENST00000460265 KCNAB2Q13303 367 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 THAP5Q7Z6K1 395 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 C7orf61Q8IZ16 206 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 AADATQ8N5Z0 425 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 CSGALNACT1Q8TDX6 532 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms