RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 NOCTQ9UK39 431 aaKnown RBP9.47□□□□□ -0.89
UFD1-205ENST00000459854 SCAMP3O14828 347 aaKnown RBP9.46□□□□□ -0.89
UFD1-205ENST00000459854 TYROBPO43914 113 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 CREBL2O60519 120 aaPredicted RBP9.46□□□□□ -0.89
UFD1-205ENST00000459854 RCBTB2O95199 551 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 MT-ND2P03891 347 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 CKMP06732 381 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 USP17L7P0C7H9 530 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 ADRA1BP35368 520 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 RPS5P46782 204 aaKnown RBP9.46□□□□□ -0.89
UFD1-205ENST00000459854 TARDBPQ13148 414 aaKnown RBP eCLIP9.46□□□□□ -0.899e-7■■■■□ 24
UFD1-205ENST00000459854 PEX6Q13608 980 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 CLCA4Q14CN2 919 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 SSX2Q16385 188 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 MBLAC2Q68D91 279 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 CES5AQ6NT32 575 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 DOK6Q6PKX4 331 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 BEND7Q8N7W2 519 aaPredicted RBP9.46□□□□□ -0.89
UFD1-205ENST00000459854 ARL11Q969Q4 196 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 PCBD2Q9H0N5 130 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 PPIL3Q9H2H8 161 aaKnown RBP9.46□□□□□ -0.89
UFD1-205ENST00000459854 C12orf65Q9H3J6 166 aaKnown RBP9.46□□□□□ -0.89
UFD1-205ENST00000459854 OSGEPL1Q9H4B0 414 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 ZNHIT2Q9UHR6 403 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 TMEM5Q9Y2B1 443 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 NOP16Q9Y3C1 178 aaKnown RBP9.46□□□□□ -0.89
UFD1-205ENST00000459854 STT3AP46977 705 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 SLC11A1P49279 550 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 MEP1AQ16819 746 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 FAM174BQ3ZCQ3 159 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 C17orf64Q86WR6 236 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 TTYH2Q9BSA4 534 aa9.46□□□□□ -0.89
UFD1-205ENST00000459854 IQCMA0A1B0GVH7 501 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 FGF18O76093 207 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 MT-ND1P03886 318 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 GALTP07902 379 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 CPN2P22792 545 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 FAM189BP81408 668 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 DEFB103AP81534 67 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 C2orf80Q0P641 193 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 SLC39A12Q504Y0 691 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 RAB11FIP2Q7L804 512 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 PIGZQ86VD9 579 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 GHDCQ8N2G8 530 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 Q8N402 240 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 SPATA6LQ8N4H0 392 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 SLC15A4Q8N697 577 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 BEST4Q8NFU0 473 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 CD300LFQ8TDQ1 290 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 SUSD3Q96L08 255 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 KXD1Q9BQD3 176 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 DUSP26Q9BV47 211 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 POTEKPQ9BYX7 375 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 AGO1Q9UL18 857 aaKnown RBP9.46□□□□□ -0.9
UFD1-205ENST00000459854 HCN4Q9Y3Q4 1203 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 DUXAA6NLW8 204 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 PROM1O43490 865 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 OR10H2O60403 315 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 H1F0P07305 194 aaKnown RBP9.46□□□□□ -0.9
UFD1-205ENST00000459854 PGAM2P15259 253 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 MSR1P21757 451 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 HOXD13P35453 343 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 BMPR1AP36894 532 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 SGCGQ13326 291 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 HNRNPDQ14103 355 aaKnown RBP9.46□□□□□ -0.9
UFD1-205ENST00000459854 GALEQ14376 348 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 ZNF630Q2M218 657 aaPredicted RBP9.46□□□□□ -0.9
UFD1-205ENST00000459854 TIGD5Q53EQ6 642 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 RAB41Q5JT25 222 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 ATG9BQ674R7 924 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 CLIP4Q8N3C7 705 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 GALNT11Q8NCW6 608 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 OR2L5Q8NG80 312 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 OR52J3Q8NH60 311 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 SPPL2BQ8TCT7 592 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 PIGKQ92643 395 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 ERLEC1Q96DZ1 483 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 CHFRQ96EP1 664 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 OR5B12Q96R08 314 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 DPCDQ9BVM2 203 aaPredicted RBP9.46□□□□□ -0.9
UFD1-205ENST00000459854 IGFLR1Q9H665 355 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 CERS4Q9HA82 394 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 FAM120CQ9NX05 1096 aaKnown RBP9.46□□□□□ -0.9
UFD1-205ENST00000459854 C14orf166Q9Y224 244 aaKnown RBP9.46□□□□□ -0.9
UFD1-205ENST00000459854 PCDHB3Q9Y5E6 796 aa9.46□□□□□ -0.9
UFD1-205ENST00000459854 MT-ND5P03915 603 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 ACVR2AP27037 513 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 ATP5C1P36542 298 aaKnown RBP9.45□□□□□ -0.9
UFD1-205ENST00000459854 NRG1Q02297 640 aaPredicted RBP9.45□□□□□ -0.9
UFD1-205ENST00000459854 SCARB2Q14108 478 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 CRB2Q5IJ48 1285 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 OR52E8Q6IFG1 317 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 PRSS48Q7RTY5 328 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 GID4Q8IVV7 300 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 ABHD11Q8NFV4 315 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 IGSF21Q96ID5 467 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 SSX3Q99909 188 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 ZNF700Q9H0M5 742 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 RNF121Q9H920 327 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 TLR9Q9NR96 1032 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms