RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 CAB39LQ9H9S4 337 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 RNPEPL1Q9HAU8 725 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 FOLH1BQ9HBA9 442 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 CNNM1Q9NRU3 951 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 ZCCHC3Q9NUD5 404 aaKnown RBP5.22□□□□□ -1.57
VPS41-209ENST00000457055 MRPL22Q9NWU5 206 aaKnown RBP5.22□□□□□ -1.57
VPS41-209ENST00000457055 P4HTMQ9NXG6 502 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 COL20A1Q9P218 1284 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 LPAR3Q9UBY5 353 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 NOCTQ9UK39 431 aaKnown RBP5.22□□□□□ -1.57
VPS41-209ENST00000457055 SLC12A4Q9UP95 1085 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 MFHAS1Q9Y4C4 1052 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 HYOU1Q9Y4L1 999 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 PCDHA1Q9Y5I3 950 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 PCDHAC2Q9Y5I4 1007 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 DOT1LQ8TEK3 1739 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 FAM237BA0A1B0GVD1 139 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 A0A1W2PQ72 361 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 TCRBV21S2A2A0A5A6 115 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 UBA6A0AVT1 1052 aaPredicted RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 GLTPD2A6NH11 291 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 ZNF98A6NK75 572 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 DRGXA6NNA5 263 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 C4orf47A7E2U8 309 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 WASHC1A8K0Z3 465 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 KCNJ18B7U540 433 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 WASH3PC4AMC7 463 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 LRRN3E7EW58 273 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 CLOCKO15516 846 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 ADCY6O43306 1168 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 DCXO43602 365 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 MGRN1O60291 552 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 HBP1O60381 514 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 SCN2BO60939 215 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 FAM20BO75063 409 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 SERPINB7O75635 380 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 DFFBO76075 338 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 NOL4O94818 638 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 PLEKHA8P1O95397 391 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 ZBTB11O95625 1053 aaPredicted RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 SYF2O95926 243 aaKnown RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 MT-ND5P03915 603 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 GBAP04062 536 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 UGT2B4P06133 528 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 HMBSP08397 361 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 IQCF3P0C7M6 154 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 CCL2P13500 99 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 ITIH1P19827 911 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 AGAP20933 346 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 DGKAP23743 735 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 ARL1P40616 181 aaPredicted RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 FRKP42685 505 aaPredicted RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 KCNJ1P48048 391 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 CLK3P49761 638 aaKnown RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 RAB28P51157 221 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 UCP2P55851 309 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 RPS16P62249 146 aaKnown RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 RPL7AP62424 266 aaKnown RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 CSNK1G2P78368 415 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 MXRA7P84157 204 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 BNC1Q01954 994 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 CDH17Q12864 832 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 BAATQ14032 418 aaPredicted RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 RCAN2Q14206 197 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 KCNJ12Q14500 433 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 PDK3Q15120 406 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 CYTH1Q15438 398 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 SHBQ15464 509 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 ZNF174Q15697 407 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 ETFDHQ16134 617 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 C3orf36Q3SXR2 165 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 CERKLQ49MI3 558 aaPredicted RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 GTDC1Q4AE62 458 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 PITRM1Q5JRX3 1037 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 RAP1GAP2Q684P5 730 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 LRRC66Q68CR7 880 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 ANKS6Q68DC2 871 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 LAIR1Q6GTX8 287 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 MSANTD2Q6P1R3 559 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 FUT10Q6P4F1 479 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 WASH2PQ6VEQ5 465 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 EIF3MQ7L2H7 374 aaKnown RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 GPR141Q7Z602 305 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 YRDCQ86U90 279 aaKnown RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 ZNF410Q86VK4 478 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 SERPINA12Q8IW75 414 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 NAGSQ8N159 534 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 FBXL16Q8N461 479 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 UBL4BQ8N7F7 174 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 OR9K2Q8NGE7 335 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 LHFPL5Q8TAF8 219 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 ZCCHC10Q8TBK6 192 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 GRAPLQ8TC17 118 aaPredicted RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 RASSF5Q8WWW0 418 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 ROBO4Q8WZ75 1007 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 GTF3AQ92664 365 aaKnown RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 CD101Q93033 1021 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 NKD2Q969F2 451 aaPredicted RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 TMEM143Q96AN5 459 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 HAUS1Q96CS2 278 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms