RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 MDC1Q14676 2089 aaKnown RBP17.01■□□□□ 0.31
FAM239A-203ENST00000456563 TMEM114B3SHH9 223 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 STMND1H3BQB6 276 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 FOXE1O00358 373 aaPredicted RBP17.01■□□□□ 0.31
FAM239A-203ENST00000456563 TBX6O95947 436 aaPredicted RBP17.01■□□□□ 0.31
FAM239A-203ENST00000456563 SERPIND1P05546 499 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 CAPN1P07384 714 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 NEFHP12036 1026 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 NR1D1P20393 614 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 BGNP21810 368 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 RORAP35398 523 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 PHEXP78562 749 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 FAM53BQ14153 422 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 CES4AQ5XG92 561 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 TTC19Q6DKK2 380 aaPredicted RBP17.01■□□□□ 0.31
FAM239A-203ENST00000456563 CDYL2Q8N8U2 506 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 HUS1BQ8NHY5 278 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 PROKR1Q8TCW9 393 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 CLIP3Q96DZ5 547 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 TXLNGQ9NUQ3 528 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 PPT2Q9UMR5 302 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 SNX6Q9UNH7 406 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 SLC22A7Q9Y694 548 aa17.01■□□□□ 0.31
FAM239A-203ENST00000456563 A0A1B0GX78 115 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 LRIT2A6NDA9 550 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 URADA6NGE7 173 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 FFAR3O14843 346 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 DSCR3O14972 297 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 GPR42O15529 346 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 SNUPNO95149 360 aaKnown RBP17■□□□□ 0.31
FAM239A-203ENST00000456563 MED26O95402 600 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 CAPNS1P04632 268 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 CHRNGP07510 517 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 CHN1P15882 459 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 ARRB2P32121 409 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 STXBP1P61764 594 aaKnown RBP17■□□□□ 0.31
FAM239A-203ENST00000456563 IFT88Q13099 833 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 STX3Q13277 289 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 ADPRMQ3LIE5 342 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 ZNF385CQ66K41 422 aaPredicted RBP17■□□□□ 0.31
FAM239A-203ENST00000456563 C6orf15Q6UXA7 325 aaPredicted RBP17■□□□□ 0.31
FAM239A-203ENST00000456563 TTLL10Q6ZVT0 673 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 TIPARPQ7Z3E1 657 aaKnown RBP17■□□□□ 0.31
FAM239A-203ENST00000456563 CUZD1Q86UP6 607 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 ZFAND4Q86XD8 727 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 DTX1Q86Y01 620 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 TRIM42Q8IWZ5 723 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 HOMEZQ8IX15 550 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 GALNT6Q8NCL4 622 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 RAB3IL1Q8TBN0 382 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 METTL6Q8TCB7 284 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 CCT6BQ92526 530 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 FGF11Q92914 225 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 MVB12AQ96EY5 273 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 MS4A8Q9BY19 250 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 ELOVL6Q9H5J4 265 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 CCDC86Q9H6F5 360 aaKnown RBP17■□□□□ 0.31
FAM239A-203ENST00000456563 DMRT3Q9NQL9 472 aa17■□□□□ 0.31
FAM239A-203ENST00000456563 DHCR7Q9UBM7 475 aaKnown RBP17■□□□□ 0.31
FAM239A-203ENST00000456563 MEN1O00255 615 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 MANBAO00462 879 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 KRT6AP02538 564 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 KRT6BP04259 564 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 KLK3P07288 261 aaPredicted RBP16.99■□□□□ 0.31
FAM239A-203ENST00000456563 FGF4P08620 206 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 SMIM10L1P0DMW3 83 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 ALAS2P22557 587 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 HMOX2P30519 316 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 HNRNPH1P31943 449 aaKnown RBP16.99■□□□□ 0.31
FAM239A-203ENST00000456563 KRT6CP48668 564 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 NEK2P51955 445 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 ABCE1P61221 599 aaKnown RBP16.99■□□□□ 0.31
FAM239A-203ENST00000456563 ZNF33BQ06732 778 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 DDX39BQ13838 428 aaKnown RBP16.99■□□□□ 0.31
FAM239A-203ENST00000456563 TOR1AIP1Q5JTV8 583 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 PRMT9Q6P2P2 845 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 ZNF517Q6ZMY9 492 aaPredicted RBP16.99■□□□□ 0.31
FAM239A-203ENST00000456563 ATG14Q6ZNE5 492 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 DSELQ8IZU8 1212 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 NLGN4XQ8N0W4 816 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 AFAP1L2Q8N4X5 818 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 ESX1Q8N693 406 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 NLGN4YQ8NFZ3 816 aaPredicted RBP16.99■□□□□ 0.31
FAM239A-203ENST00000456563 UTP15Q8TED0 518 aaKnown RBP16.99■□□□□ 0.31
FAM239A-203ENST00000456563 MS4A6EQ96DS6 147 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 RNF31Q96EP0 1072 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 CMTM7Q96FZ5 175 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 SMIM10Q96HG1 83 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 GBP5Q96PP8 586 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 MTERF1Q99551 399 aaKnown RBP16.99■□□□□ 0.31
FAM239A-203ENST00000456563 DPH2Q9BQC3 489 aaPredicted RBP16.99■□□□□ 0.31
FAM239A-203ENST00000456563 SHCBP1LQ9BZQ2 653 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 AICDAQ9GZX7 198 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 KLHL31Q9H511 634 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 TNFRSF12AQ9NP84 129 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 INTS9Q9NV88 658 aaKnown RBP16.99■□□□□ 0.31
FAM239A-203ENST00000456563 CDC14AQ9UNH5 594 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 MRPS2Q9Y399 296 aaKnown RBP16.99■□□□□ 0.31
FAM239A-203ENST00000456563 TIMM22Q9Y584 194 aa16.99■□□□□ 0.31
FAM239A-203ENST00000456563 SPTBP11277 2137 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms