RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 C1GALT1C1LP0DN25 315 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 MTHFD2P13995 350 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 CXCR2P25025 360 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 GSTM2P28161 218 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 HSPA7P48741 367 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 KLC1Q07866 573 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 RGS1Q08116 209 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 HERC3Q15034 1050 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 PDK4Q16654 411 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 TEX35Q5T0J7 233 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 KLC3Q6P597 504 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 CNPY4Q8N129 248 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 AFAP1L2Q8N4X5 818 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 KCT2Q8NC54 265 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 FDCSPQ8NFU4 85 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 UHMK1Q8TAS1 419 aaKnown RBP16.44■□□□□ 0.22
USP39-208ENST00000455732 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.44■□□□□ 0.22
USP39-208ENST00000455732 EXT2Q93063 718 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 WDR34Q96EX3 536 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 SEC16BQ96JE7 1060 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 MACROD1Q9BQ69 325 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 CD244Q9BZW8 370 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 P4HTMQ9NXG6 502 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 TRPC4Q9UBN4 977 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 HS3ST3B1Q9Y662 390 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 MAST4O15021 2626 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 RP1L1Q8IWN7 2480 aaPredicted RBP16.43■□□□□ 0.22
USP39-208ENST00000455732 SUPT3HB4E1H0 165 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 AGPSO00116 658 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 UBXN8O00124 270 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 SOCS6O14544 535 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 PCDH17O14917 1159 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 SUPT3HO75486 399 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 CYC1P08574 325 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 MYBL2P10244 700 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 VARSP26640 1264 aaKnown RBP16.43■□□□□ 0.22
USP39-208ENST00000455732 GCAP28676 217 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 PGDP52209 483 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 E2F2Q14209 437 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 DCAF10Q5QP82 559 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 NIPAL1Q6NVV3 410 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 TRPV3Q8NET8 790 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 TTLQ8NG68 377 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 OR9A4Q8NGU2 314 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 MOCOSQ96EN8 888 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 CRB3Q9BUF7 120 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 NUDT9Q9BW91 350 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 SLC6A16Q9GZN6 736 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 VPS11Q9H270 941 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 EPB41L4BQ9H329 900 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 NT5DC2Q9H857 520 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 ANKHQ9HCJ1 492 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 PCDHGB7Q9Y5F8 929 aa16.43■□□□□ 0.22
USP39-208ENST00000455732 A0A1W2PQ72 361 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 TRIM49D1C9J1S8 452 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 CLGNO14967 610 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 KLK8O60259 260 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 H2AFYO75367 372 aaKnown RBP16.42■□□□□ 0.22
USP39-208ENST00000455732 SERPINA6P08185 405 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 SNRPAP09012 282 aaKnown RBP16.42■□□□□ 0.22
USP39-208ENST00000455732 COL6A2P12110 1019 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 IL1RNP18510 177 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 EPORP19235 508 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 GLRBP48167 497 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 PCDH1Q08174 1060 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 SLBPQ14493 270 aaKnown RBP eCLIP16.42■□□□□ 0.22
USP39-208ENST00000455732 TBCCQ15814 346 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 FBXO48Q5FWF7 155 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 VWA2Q5GFL6 755 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 TECRLQ5HYJ1 363 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 COLEC12Q5KU26 742 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 ADGRD1Q6QNK2 874 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 KIRREL2Q6UWL6 708 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 TMIGD1Q6UXZ0 262 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 SHISA6Q6ZSJ9 500 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 PRSS41Q7RTY9 318 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 PDSS2Q86YH6 399 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 ZC3H7AQ8IWR0 971 aaKnown RBP16.42■□□□□ 0.22
USP39-208ENST00000455732 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.42■□□□□ 0.22
USP39-208ENST00000455732 GSPT2Q8IYD1 628 aaKnown RBP16.42■□□□□ 0.22
USP39-208ENST00000455732 KRT78Q8N1N4 520 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 TEX19Q8NA77 164 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 CLEC1AQ8NC01 280 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 ZCCHC10Q8TBK6 192 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 CREB3L4Q8TEY5 395 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 ESAMQ96AP7 390 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 MTBPQ96DY7 904 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 PTCD3Q96EY7 689 aaKnown RBP16.42■□□□□ 0.22
USP39-208ENST00000455732 VPS50Q96JG6 964 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 C3orf18Q9UK00 162 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 ASB1Q9Y576 335 aa16.42■□□□□ 0.22
USP39-208ENST00000455732 SHANK1Q9Y566 2161 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 URADA6NGE7 173 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 IDSB3KWA1 339 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 K7EPI3 171 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 MAP2K7O14733 419 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 CCNT2O60583 730 aaKnown RBP16.41■□□□□ 0.22
USP39-208ENST00000455732 PRAMEF4O60810 478 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 KLHL18O94889 574 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 ALOX12P18054 663 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms