RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 NOVA1P51513 510 aaKnown RBP15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 VSX2P58304 361 aaPredicted RBP15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 SIM1P81133 766 aaPredicted RBP15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 HMGCS1Q01581 520 aa15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 PRTGQ2VWP7 1150 aa15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 SLC9B1Q4ZJI4 515 aa15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 MANEAQ5SRI9 462 aa15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 DEPDC1Q5TB30 811 aa15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 CCT6BQ92526 530 aa15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 THOC1Q96FV9 657 aaKnown RBP15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 CCT8L2Q96SF2 557 aa15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 SERPINI1Q99574 410 aa15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 AICDAQ9GZX7 198 aa15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 FAM107BQ9H098 131 aa15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 VPS29Q9UBQ0 182 aa15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 DCTN4Q9UJW0 460 aa15.83■□□□□ 0.12
CCDC90B-202ENST00000455220 SPTBP11277 2137 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 LRIT2A6NDA9 550 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 LSM1O15116 133 aaKnown RBP15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 ZSCAN9O15535 394 aaPredicted RBP15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 SNX3O60493 162 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 VPS4BO75351 444 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 SEMA3DO95025 777 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 TGFB1P01137 390 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 CTSBP07858 339 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 PRR35P0CG20 571 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 HNRNPH1P31943 449 aaKnown RBP15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 IDH3AP50213 366 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 ACY1Q03154 408 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 RGS1Q08116 209 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 GPR19Q15760 415 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 ISXQ2M1V0 245 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 TCTE1Q5JU00 501 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 HES3Q5TGS1 186 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 KHDRBS2Q5VWX1 349 aaKnown RBP15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 SPATA21Q7Z572 469 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 CACTIN-AS1Q8N1I8 211 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 ARHGEF39Q8N4T4 335 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 ZNF655Q8N720 491 aaPredicted RBP15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 CSNK1A1LQ8N752 337 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 AGBL5Q8NDL9 886 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 ACTRT2Q8TDY3 377 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 ZNF501Q96CX3 271 aaPredicted RBP15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 PPP1R36Q96LQ0 422 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 EBF4Q9BQW3 602 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 WDR55Q9H6Y2 383 aaPredicted RBP15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 FGF21Q9NSA1 209 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 RIC8BQ9NVN3 520 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 SLC12A4Q9UP95 1085 aa15.82■□□□□ 0.12
CCDC90B-202ENST00000455220 KNTC1P50748 2209 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 ATP6AP2A0A1C7CYW4 349 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 FITM1A5D6W6 292 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 TXNDC9O14530 226 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 ATP6AP2O75787 350 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 KCNK5O95279 499 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 SERPIND1P05546 499 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 EPHA3P29320 983 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 CSTF2P33240 577 aaKnown RBP eCLIP15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 TBL3Q12788 808 aaKnown RBP15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 IMPG1Q17R60 797 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 HKDC1Q2TB90 917 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 TMEM35AQ53FP2 167 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 WASHC2DQ5SRD0 308 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 CHSY3Q70JA7 882 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 LARP4Q71RC2 724 aaKnown RBP eCLIP15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 PIGWQ7Z7B1 504 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 BMPERQ8N8U9 685 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 C10orf82Q8WW14 230 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 TUBGCP3Q96CW5 907 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 MS4A6EQ96DS6 147 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 LIN37Q96GY3 246 aaPredicted RBP15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 METTL2AQ96IZ6 378 aaKnown RBP15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 DEPDC7Q96QD5 511 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 ELAC2Q9BQ52 826 aaKnown RBP15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 MACROD1Q9BQ69 325 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 RTKNQ9BST9 563 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 OR51B5Q9H339 312 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 AKTIPQ9H8T0 292 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 NMRK1Q9NWW6 199 aa15.81■□□□□ 0.12
CCDC90B-202ENST00000455220 A0A0G2JND7 137 aa15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 TMEM150CB9EJG8 249 aa15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 DIAPH2O60879 1101 aa15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 CSO75390 466 aaKnown RBP15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 STATHP02808 62 aa15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 SDHBP21912 280 aa15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 ARFIP1P53367 373 aa15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 EMP3P54852 163 aa15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 CLDN6P56747 220 aa15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 STXBP1P61764 594 aaKnown RBP15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 TUBB3Q13509 450 aa15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 NR6A1Q15406 480 aa15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 RSPO4Q2I0M5 234 aaPredicted RBP15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 TMEM214Q6NUQ4 689 aaKnown RBP15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 KCT2Q8NC54 265 aa15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 OR1L3Q8NH93 324 aa15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 N4BP2L2Q92802 583 aaPredicted RBP15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 C11orf24Q96F05 449 aaPredicted RBP15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 PPP3R2Q96LZ3 170 aa15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 OR52B2Q96RD2 323 aa15.8■□□□□ 0.12
CCDC90B-202ENST00000455220 F2RL3Q96RI0 385 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms