RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 MEOX1P50221 254 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 OR4D2P58180 307 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SLC26A5P58743 744 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 BTG2P78543 158 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PRDX1Q06830 199 aaKnown RBP5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CTBP1Q13363 440 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PHKG1Q16816 387 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MEP1AQ16819 746 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 GARNL3Q5VVW2 1013 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 XKRXQ6PP77 449 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 Q6ZPB1 254 aaPredicted RBP5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 UBE2R2Q712K3 238 aaPredicted RBP5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MDGA2Q7Z553 956 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ASPGQ86U10 573 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SLC26A11Q86WA9 606 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 LRRC6Q86X45 466 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SLC13A5Q86YT5 568 aaPredicted RBP5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CILP2Q8IUL8 1156 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MMP21Q8N119 569 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 GHDCQ8N2G8 530 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 AGGF1Q8N302 714 aaeCLIP5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SLC5A8Q8N695 610 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TMEM178AQ8NBL3 297 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FBXO15Q8NCQ5 510 aaPredicted RBP5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZNF740Q8NDX6 193 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 OR5M9Q8NGP3 310 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 DNAJB8Q8NHS0 232 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CD200R1Q8TD46 325 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SLCO2A1Q92959 643 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PYCR2Q96C36 320 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 HES6Q96HZ4 224 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SEC16BQ96JE7 1060 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TSNARE1Q96NA8 513 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PANX2Q96RD6 677 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 IL22Q9GZX6 179 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 LIME1Q9H400 295 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CDCP1Q9H5V8 836 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 LIN28AQ9H9Z2 209 aaKnown RBP5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MMP25Q9NPA2 562 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 EIF2B3Q9NR50 452 aaKnown RBP5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PAK5Q9P286 719 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 C19orf25Q9UFG5 118 aaPredicted RBP5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 RIMKLBQ9ULI2 386 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 EML6Q6ZMW3 1958 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MED12Q93074 2177 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TRBV11-1A0A0K0K1C0 115 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CTAGE9A4FU28 777 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 BTNL10A8MVZ5 291 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TGFBR3LH3BV60 316 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NCKAP5O14513 1909 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PRRG2O14669 202 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 KPNA5O15131 536 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PRKNO60260 465 aaPredicted RBP5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 LCMT2O60294 686 aaKnown RBP5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PHF2O75151 1096 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FHP07954 510 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SP1P08047 785 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 IGFBP2P18065 325 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 OGNP20774 298 aaKnown RBP5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CXCR5P32302 372 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 EMP3P54852 163 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 WNT3P56703 355 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 RPS15AP62244 130 aaKnown RBP5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TFF3Q07654 80 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MYBPHQ13203 477 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NAE1Q13564 534 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PTK6Q13882 451 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FAM53BQ14153 422 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NAA25Q14CX7 972 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CEBPEQ15744 281 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 EXT1Q16394 746 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NDUFA9Q16795 377 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CMPK2Q5EBM0 449 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CATSPEREQ5SY80 951 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 RBM20Q5T481 1227 aaKnown RBP5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 RNF187Q5TA31 235 aaPredicted RBP5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 KIAA0930Q6ICG6 404 aaPredicted RBP5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MRNIPQ6NTE8 343 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NEPROQ6NW34 567 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SPNS3Q6ZMD2 512 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 Q71RC1 249 aaPredicted RBP5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 GSTA5Q7RTV2 222 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SULF2Q8IWU5 870 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SPC24Q8NBT2 197 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 OR52N2Q8NGI0 321 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MAGEC3Q8TD91 643 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ASB11Q8WXH4 323 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 C14orf79Q96F83 325 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZNF354BQ96LW1 612 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 LPAR4Q99677 370 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TREX2Q9BQ50 279 aaPredicted RBP5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 KIFC1Q9BW19 673 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ENKD1Q9H0I2 346 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 GSX1Q9H4S2 264 aaPredicted RBP5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ANKHQ9HCJ1 492 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 GPAMQ9HCL2 828 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 DEPPQ9NTK1 212 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZNF223Q9UK11 482 aaPredicted RBP5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 IKZF3Q9UKT9 509 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 GUCA1BQ9UMX6 200 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms