RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TRAF6Q9Y4K3 522 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 CROCCQ5TZA2 2017 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 GON4LQ3T8J9 2241 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 TDRD6O60522 2096 aaKnown RBP15.26■□□□□ 0.03
SNX17-204ENST00000453453 RNF103-CHMP3A0A140T963 221 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 OR5K4A6NMS3 321 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 NME4O00746 187 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 ACOX3O15254 700 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 CRCPO75575 148 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 WDR47O94967 919 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 SLC16A8O95907 504 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 SLC6A12P48065 614 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 CCSMST1Q4G0I0 132 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 RBM48Q5RL73 367 aaKnown RBP15.26■□□□□ 0.03
SNX17-204ENST00000453453 GPR107Q5VW38 600 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 KCTD8Q6ZWB6 473 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 RPS27LQ71UM5 84 aaKnown RBP15.26■□□□□ 0.03
SNX17-204ENST00000453453 GOLGA7Q7Z5G4 137 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 NRROSQ86YC3 692 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 TRIM48Q8IWZ4 208 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 SNX31Q8N9S9 440 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 CCL4L1Q8NHW4 92 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 SLC35B4Q969S0 331 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 MED8Q96G25 268 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 NSUN5Q96P11 429 aaKnown RBP15.26■□□□□ 0.03
SNX17-204ENST00000453453 LRRC61Q9BV99 259 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 ATG10Q9H0Y0 220 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 MID1IP1Q9NPA3 183 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 DNAJC11Q9NVH1 559 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 DOLKQ9UPQ8 538 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 PCDHGA2Q9Y5H1 932 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 ST14Q9Y5Y6 855 aa15.26■□□□□ 0.03
SNX17-204ENST00000453453 TTC28Q96AY4 2481 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 OR52A4PA6NMU1 304 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 TNFRSF10AO00220 468 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 GPR37L1O60883 481 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 BCL10O95999 233 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 OTCP00480 354 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 FGF4P08620 206 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 NELFEP18615 380 aaKnown RBP15.25■□□□□ 0.03
SNX17-204ENST00000453453 IMPA1P29218 277 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 HOXD12P35452 270 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 PNLIPRP1P54315 467 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 EEFSECP57772 596 aaKnown RBP15.25■□□□□ 0.03
SNX17-204ENST00000453453 PRKG2Q13237 762 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 SIM2Q14190 667 aaPredicted RBP15.25■□□□□ 0.03
SNX17-204ENST00000453453 ARHGAP19Q14CB8 494 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 PTCHD3Q3KNS1 767 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 BROXQ5VW32 411 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 CAPN13Q6MZZ7 669 aaPredicted RBP15.25■□□□□ 0.03
SNX17-204ENST00000453453 PRR23BQ6ZRT6 265 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 SYT12Q8IV01 421 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 HOMEZQ8IX15 550 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 MIER2Q8N344 545 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 SDR16C5Q8N3Y7 309 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 SFRP1Q8N474 314 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 PIGKQ92643 395 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 C19orf60Q96EN9 201 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 ZNF382Q96SR6 550 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 ERVMER34-1Q9H9K5 563 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 ATAD3AQ9NVI7 634 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 PILRBQ9UKJ0 227 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 HEMK1Q9Y5R4 338 aaPredicted RBP15.25■□□□□ 0.03
SNX17-204ENST00000453453 KIR2DS5A0A0G2JLQ3 304 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 A0A0G2JNG1 304 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 A0A1B0GVT2 93 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 A0A1W2PPW3 197 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 KRT87PA6NCN2 255 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 KIR2DS3K7RE56 304 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 CLPXO76031 633 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 HPRP00739 348 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 ALOX5P09917 674 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 TSPAN8P19075 237 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 GDF5P43026 501 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 NUBP1P53384 320 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 GABARAPL2P60520 117 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 EPS8Q12929 822 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 NAE1Q13564 534 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 KIR2DS5Q14953 304 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 FXNQ16595 210 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 CYBRD1Q53TN4 286 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 TMEM26Q6ZUK4 368 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 GPRIN3Q6ZVF9 776 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 FUNDC1Q8IVP5 155 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 SLC15A3Q8IY34 581 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 KLHDC8AQ8IYD2 350 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 CLYBLQ8N0X4 340 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 ZBTB44Q8NCP5 570 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 LMX1AQ8TE12 382 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 ZNF480Q8WV37 535 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 CAMK1GQ96NX5 476 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 NEURL2Q9BR09 285 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 IPPKQ9H8X2 491 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 INIPQ9NRY2 104 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 PSME2Q9UL46 239 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 ASB1Q9Y576 335 aa15.25■□□□□ 0.03
SNX17-204ENST00000453453 A6NCN8 305 aa15.24■□□□□ 0.03
SNX17-204ENST00000453453 ANGPT2O15123 496 aa15.24■□□□□ 0.03
SNX17-204ENST00000453453 ARPC2O15144 300 aa15.24■□□□□ 0.03
SNX17-204ENST00000453453 E2F6O75461 281 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms