RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 MUC22E2RYF6 1773 aaPredicted RBP11.31□□□□□ -0.6
VTA1-203ENST00000452973 KMOO15229 486 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 ADH1BP00325 375 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 DNTTP04053 509 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 RETP07949 1114 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 MYF6P23409 242 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 SOAT1P35610 550 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 KIR2DL1P43626 348 aaPredicted RBP11.3□□□□□ -0.6
VTA1-203ENST00000452973 ALDH3A2P51648 485 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 TPD52P55327 224 aaPredicted RBP11.3□□□□□ -0.6
VTA1-203ENST00000452973 HBA1P69905 142 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 DAG1Q14118 895 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 CYP2A13Q16696 494 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 OR5K2Q8NHB8 316 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 ZFP28Q8NHY6 868 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 TRIT1Q9H3H1 467 aaKnown RBP11.3□□□□□ -0.6
VTA1-203ENST00000452973 CLEC1BQ9P126 229 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 AP3M1Q9Y2T2 418 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 PCDHB11Q9Y5F2 797 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 H3BSA7 217 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 THRBP10828 461 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 ACPPP15309 386 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 TMEM196Q5HYL7 178 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 LAS2Q8IYD9 372 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 ZZZ3Q8IYH5 903 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 NAGSQ8N159 534 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 C16orf78Q8WTQ4 265 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 PPCDCQ96CD2 204 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 HHIPQ96QV1 700 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 SLC17A9Q9BYT1 436 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 TOR3AQ9H497 397 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 REEP4Q9H6H4 257 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 CD93Q9NPY3 652 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 MIEF1Q9NQG6 463 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 PAPOLBQ9NRJ5 636 aaKnown RBP11.3□□□□□ -0.6
VTA1-203ENST00000452973 PHPT1Q9NRX4 125 aaPredicted RBP11.3□□□□□ -0.6
VTA1-203ENST00000452973 C5AR2Q9P296 337 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 ABCG2Q9UNQ0 655 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 CA5BQ9Y2D0 317 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 B4GAT1O43505 415 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 CCNDBP1O95273 360 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 OPN1SWP03999 348 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 ALPLP05186 524 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 IL3P08700 152 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 EEF1B2P24534 225 aaKnown RBP11.3□□□□□ -0.6
VTA1-203ENST00000452973 ELK4P28324 431 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 EIF2DP41214 584 aaKnown RBP11.3□□□□□ -0.6
VTA1-203ENST00000452973 NR1H2P55055 460 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 APOFQ13790 326 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 SDE2Q6IQ49 451 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 VN1R5Q7Z5H4 357 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 GALNT5Q7Z7M9 940 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 SERPINA11Q86U17 422 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 PTOV1Q86YD1 416 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 ADHFE1Q8IWW8 467 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 KLHDC8AQ8IYD2 350 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 KRT78Q8N1N4 520 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 INSM2Q96T92 566 aaPredicted RBP11.3□□□□□ -0.6
VTA1-203ENST00000452973 MACROD1Q9BQ69 325 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 HAUS8Q9BT25 410 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 ING2Q9H160 280 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 PNMA8BQ9ULN7 279 aaPredicted RBP11.3□□□□□ -0.6
VTA1-203ENST00000452973 FAF1Q9UNN5 650 aaPredicted RBP11.3□□□□□ -0.6
VTA1-203ENST00000452973 MAP4K5Q9Y4K4 846 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 SNX8Q9Y5X2 465 aa11.3□□□□□ -0.6
VTA1-203ENST00000452973 FOXE1O00358 373 aaPredicted RBP11.29□□□□□ -0.6
VTA1-203ENST00000452973 OR1F1O43749 312 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 RNGTTO60942 597 aaKnown RBP11.29□□□□□ -0.6
VTA1-203ENST00000452973 KLF8O95600 359 aaPredicted RBP11.29□□□□□ -0.6
VTA1-203ENST00000452973 ETFAP13804 333 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 HOXB2P14652 356 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 GPX2P18283 190 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 KDELR2P33947 212 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 CCR3P51677 355 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 CLDN2P57739 230 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 COX20Q5RI15 118 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 CCNYL2Q5T2Q4 361 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 ABRAXAS1Q6UWZ7 409 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 EID3Q8N140 333 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 STARD8Q92502 1023 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 TEX101Q9BY14 249 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 BAG5Q9UL15 447 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 COL4A3Q01955 1670 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 KIAA1549LQ6ZVL6 1849 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 TRBV23OR9-2A0A075B6M9 112 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 EGFP01133 1207 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 RPN2P04844 631 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 NTSR1P30989 418 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 POLR2IP36954 125 aaKnown RBP11.29□□□□□ -0.6
VTA1-203ENST00000452973 RPS21P63220 83 aaKnown RBP11.29□□□□□ -0.6
VTA1-203ENST00000452973 PHEXP78562 749 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 RPA4Q13156 261 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 ADRM1Q16186 407 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 ANXA8L1Q5VT79 327 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 MSANTD1Q6ZTZ1 278 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 ANKRD53Q8N9V6 530 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 SETD7Q8WTS6 366 aaKnown RBP11.29□□□□□ -0.6
VTA1-203ENST00000452973 BARD1Q99728 777 aaKnown RBP11.29□□□□□ -0.6
VTA1-203ENST00000452973 ABCG4Q9H172 646 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 ADNPQ9H2P0 1102 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms