RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 C9orf57Q5W0N0 161 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 BICRALQ6AI39 1079 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 CHMP1BQ7LBR1 199 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 LUZP2Q86TE4 346 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 TMEM145Q8NBT3 493 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 OR7G3Q8NG95 312 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 OR10G2Q8NGC3 310 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 OR13C4Q8NGS5 318 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 OR4L1Q8NH43 312 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 DNAJB8Q8NHS0 232 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 CEP76Q8TAP6 659 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 ASIC4Q96FT7 647 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 FOLH1BQ9HBA9 442 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 COMMD3Q9UBI1 195 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 MRPS7Q9Y2R9 242 aaKnown RBP9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 ARL5AQ9Y689 179 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 SBF1O95248 1867 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 COL16A1Q07092 1604 aaPredicted RBP9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 HYKKA2RU49 373 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 HNRNPCL2B2RXH8 293 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 DSC2Q02487 901 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 SLC14A1Q13336 389 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 IL18Q14116 193 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 VMACQ2NL98 169 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 IQCCQ4KMZ1 466 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 SLC39A12Q504Y0 691 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 KLHL22Q53GT1 634 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 IGSF11Q5DX21 431 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 ZNF551Q7Z340 670 aaPredicted RBP9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 REPS2Q8NFH8 660 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 RTP3Q9BQQ7 232 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 POLR2J2Q9GZM3 115 aaKnown RBP9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 ABHD16BQ9H3Z7 469 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 SAV1Q9H4B6 383 aaPredicted RBP9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 CLN6Q9NWW5 311 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 CNOT2Q9NZN8 540 aaKnown RBP9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 PLEKHB1Q9UF11 243 aaPredicted RBP9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 PCDHGB7Q9Y5F8 929 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 PCDHGA2Q9Y5H1 932 aa9.09□□□□□ -0.95
SYNPO2-204ENST00000448416 CHP2O43745 196 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 CCNB2O95067 398 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 B3GALT4O96024 378 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 CHRM5P08912 532 aaPredicted RBP9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 F8A1P23610 371 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 CDKN2CP42773 168 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 ALDH9A1P49189 494 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 CLCN4P51793 760 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 STC1P52823 247 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 CYP4F8P98187 520 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 PCDH1Q08174 1060 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 GRM7Q14831 915 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 C18orf21Q32NC0 220 aaPredicted RBP9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 USP39Q53GS9 565 aaKnown RBP9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 LRIF1Q5T3J3 769 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 SUSD1Q6UWL2 747 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 CBLL1Q75N03 491 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 OR6M1Q8NGM8 313 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 OR52J3Q8NH60 311 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 PGAP3Q96FM1 320 aaPredicted RBP9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 LINC00052Q96N35 136 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 C1QTNF6Q9BXI9 259 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 MCOLN1Q9GZU1 580 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 TSR3Q9UJK0 312 aaKnown RBP9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 SLC6A14Q9UN76 642 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 POFUT2Q9Y2G5 429 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 ACTL7AQ9Y615 435 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 ZNF98A6NK75 572 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 RFXANKO14593 260 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 NDUFS3O75489 264 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 IL1AP01583 271 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 VTNP04004 478 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 PIRTP0C851 137 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 FAM157BP0CG42 384 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 CDC42P60953 191 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 TUSC1Q2TAM9 212 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 MSANTD2Q6P1R3 559 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 PTCHD4Q6ZW05 846 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 GOLGA7Q7Z5G4 137 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 FAM124AQ86V42 546 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 DENND1CQ8IV53 801 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 CLDN22Q8N7P3 220 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 SRFBP1Q8NEF9 429 aaKnown RBP9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 OR11H4Q8NGC9 324 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 SLC9A6Q92581 669 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 UFD1Q92890 307 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 IMP4Q96G21 291 aaKnown RBP9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 NFKBIZQ9BYH8 718 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 GSX2Q9BZM3 304 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 SERHL2Q9H4I8 314 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 IPPKQ9H8X2 491 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 SLC28A3Q9HAS3 691 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 LRTM1Q9HBL6 345 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 ATP13A1Q9HD20 1204 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 ZFP64Q9NPA5 681 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 SERHLQ9NQF3 203 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 PCDHB16Q9NRJ7 776 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 TMEM184CQ9NVA4 438 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 RLIMQ9NVW2 624 aa9.08□□□□□ -0.96
SYNPO2-204ENST00000448416 CUEDC1Q9NWM3 386 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms