RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 CCR8P51685 355 aa26.63■■□□□ 1.85
CBX4-202ENST00000448310 OLR1P78380 273 aa26.63■■□□□ 1.85
CBX4-202ENST00000448310 NSDHLQ15738 373 aa26.63■■□□□ 1.85
CBX4-202ENST00000448310 HP1BP3Q5SSJ5 553 aaPredicted RBP26.63■■□□□ 1.85
CBX4-202ENST00000448310 PCGF5Q86SE9 256 aa26.63■■□□□ 1.85
CBX4-202ENST00000448310 GPATCH11Q8N954 259 aa26.63■■□□□ 1.85
CBX4-202ENST00000448310 ZNF740Q8NDX6 193 aa26.63■■□□□ 1.85
CBX4-202ENST00000448310 ABHD11Q8NFV4 315 aa26.63■■□□□ 1.85
CBX4-202ENST00000448310 GABPB2Q8TAK5 448 aaPredicted RBP26.63■■□□□ 1.85
CBX4-202ENST00000448310 ITLN2Q8WWU7 325 aaPredicted RBP26.63■■□□□ 1.85
CBX4-202ENST00000448310 SNF8Q96H20 258 aa26.63■■□□□ 1.85
CBX4-202ENST00000448310 SIGLEC12Q96PQ1 595 aa26.63■■□□□ 1.85
CBX4-202ENST00000448310 HES7Q9BYE0 225 aa26.63■■□□□ 1.85
CBX4-202ENST00000448310 PLAC1Q9HBJ0 212 aa26.63■■□□□ 1.85
CBX4-202ENST00000448310 PPANQ9NQ55 473 aaKnown RBP26.63■■□□□ 1.85
CBX4-202ENST00000448310 ENO4A6NNW6 628 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 SERPIND1P05546 499 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 IL2P60568 153 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 ACTN3Q08043 901 aaPredicted RBP26.62■■□□□ 1.85
CBX4-202ENST00000448310 PDAP1Q13442 181 aaKnown RBP26.62■■□□□ 1.85
CBX4-202ENST00000448310 TUBA3CQ13748 450 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 EXT1Q16394 746 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 CATSPEREQ5SY80 951 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 DUPD1Q68J44 220 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 TUBA3EQ6PEY2 450 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 KIAA0408Q6ZU52 694 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 OR56A3Q8NH54 315 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 M1APQ8TC57 530 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 CCDC120Q96HB5 630 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 FAM129AQ9BZQ8 928 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 UNKQ9C0B0 810 aaKnown RBP26.62■■□□□ 1.85
CBX4-202ENST00000448310 SPNS1Q9H2V7 528 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 KLHL1Q9NR64 748 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 CSMD1Q96PZ7 3565 aa26.62■■□□□ 1.85
CBX4-202ENST00000448310 PABPN1LA6NDY0 278 aaKnown RBP26.61■■□□□ 1.85
CBX4-202ENST00000448310 CCL21O00585 134 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 GUCA1CO95843 209 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 GRNP28799 593 aaKnown RBP26.61■■□□□ 1.85
CBX4-202ENST00000448310 HERC3Q15034 1050 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 MEP1AQ16819 746 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 DEFB134Q4QY38 66 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 TEDDM1Q5T9Z0 273 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 HECTD2Q5U5R9 776 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 AFAP1L2Q8N4X5 818 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 MDS2Q8NDY4 140 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 PLPP5Q8NEB5 264 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 OR4K1Q8NGD4 311 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 CFAP36Q96G28 342 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 PWWP2AQ96N64 755 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 LPAR4Q99677 370 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 OLFM1Q99784 485 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 MMP25Q9NPA2 562 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 SUCOQ9UBS9 1254 aaKnown RBP26.61■■□□□ 1.85
CBX4-202ENST00000448310 IKZF3Q9UKT9 509 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 SNX12Q9UMY4 172 aa26.61■■□□□ 1.85
CBX4-202ENST00000448310 GALR3O60755 368 aaPredicted RBP26.6■■□□□ 1.85
CBX4-202ENST00000448310 TNFRSF8P28908 595 aa26.6■■□□□ 1.85
CBX4-202ENST00000448310 CD96P40200 585 aa26.6■■□□□ 1.85
CBX4-202ENST00000448310 CA7P43166 264 aa26.6■■□□□ 1.85
CBX4-202ENST00000448310 USP10Q14694 798 aaKnown RBP26.6■■□□□ 1.85
CBX4-202ENST00000448310 OR1F2PQ96R84 312 aa26.6■■□□□ 1.85
CBX4-202ENST00000448310 UTP23Q9BRU9 249 aaKnown RBP26.6■■□□□ 1.85
CBX4-202ENST00000448310 NAT9Q9BTE0 207 aa26.6■■□□□ 1.85
CBX4-202ENST00000448310 TRBC2A0A5B9 178 aa26.59■■□□□ 1.85
CBX4-202ENST00000448310 MAGEB17A8MXT2 336 aa26.59■■□□□ 1.85
CBX4-202ENST00000448310 FHP07954 510 aa26.59■■□□□ 1.85
CBX4-202ENST00000448310 ALOX12P18054 663 aa26.59■■□□□ 1.85
CBX4-202ENST00000448310 AP1S2P56377 157 aa26.59■■□□□ 1.85
CBX4-202ENST00000448310 OR4D2P58180 307 aa26.59■■□□□ 1.85
CBX4-202ENST00000448310 OR1C1Q15619 314 aa26.59■■□□□ 1.85
CBX4-202ENST00000448310 SPINK14Q6IE38 97 aa26.59■■□□□ 1.85
CBX4-202ENST00000448310 TRMT10BQ6PF06 316 aaKnown RBP26.59■■□□□ 1.85
CBX4-202ENST00000448310 NEIL2Q969S2 332 aa26.59■■□□□ 1.85
CBX4-202ENST00000448310 FBXL8Q96CD0 374 aa26.59■■□□□ 1.85
CBX4-202ENST00000448310 TSNARE1Q96NA8 513 aa26.59■■□□□ 1.85
CBX4-202ENST00000448310 SARGQ9BW04 601 aa26.59■■□□□ 1.85
CBX4-202ENST00000448310 TRIM54Q9BYV2 358 aa26.59■■□□□ 1.85
CBX4-202ENST00000448310 TSPAN10Q9H1Z9 355 aaPredicted RBP26.59■■□□□ 1.85
CBX4-202ENST00000448310 CHMP2BQ9UQN3 213 aa26.59■■□□□ 1.85
CBX4-202ENST00000448310 APCP25054 2843 aa26.58■■□□□ 1.85
CBX4-202ENST00000448310 CTAGE15A4D2H0 777 aa26.58■■□□□ 1.85
CBX4-202ENST00000448310 FAM227AF5H4B4 570 aa26.58■■□□□ 1.85
CBX4-202ENST00000448310 TTI1O43156 1089 aa26.58■■□□□ 1.85
CBX4-202ENST00000448310 CHST10O43529 356 aa26.58■■□□□ 1.85
CBX4-202ENST00000448310 ZNF888P0CJ79 500 aaPredicted RBP26.58■■□□□ 1.85
CBX4-202ENST00000448310 IL10P22301 178 aa26.58■■□□□ 1.85
CBX4-202ENST00000448310 ELK3P41970 407 aa26.58■■□□□ 1.85
CBX4-202ENST00000448310 SLC26A5P58743 744 aa26.58■■□□□ 1.85
CBX4-202ENST00000448310 PWP1Q13610 501 aa26.58■■□□□ 1.85
CBX4-202ENST00000448310 GALNT7Q86SF2 657 aa26.58■■□□□ 1.85
CBX4-202ENST00000448310 MRGPRGQ86SM5 289 aa26.58■■□□□ 1.85
CBX4-202ENST00000448310 CTAGE6Q86UF2 777 aa26.58■■□□□ 1.85
CBX4-202ENST00000448310 SLC5A11Q8WWX8 675 aa26.58■■□□□ 1.85
CBX4-202ENST00000448310 TBC1D20Q96BZ9 403 aa26.58■■□□□ 1.85
CBX4-202ENST00000448310 WDR83Q9BRX9 315 aaKnown RBP26.58■■□□□ 1.85
CBX4-202ENST00000448310 VWA7Q9Y334 891 aa26.58■■□□□ 1.85
CBX4-202ENST00000448310 GABRR3A8MPY1 467 aa26.57■■□□□ 1.84
CBX4-202ENST00000448310 B4GALT2O60909 372 aa26.57■■□□□ 1.84
CBX4-202ENST00000448310 IVDP26440 423 aa26.57■■□□□ 1.84
CBX4-202ENST00000448310 OC90Q02509 493 aaPredicted RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms