RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 SPATA22Q8NHS9 363 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 TMEM255BQ8WV15 326 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 GIMAP1Q8WWP7 306 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 NT5C3BQ969T7 300 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 LGALS12Q96DT0 336 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 RBM41Q96IZ5 413 aaKnown RBP4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 COG3Q96JB2 828 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 C4orf36Q96KX1 117 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 BDH2Q9BUT1 245 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 DUSP26Q9BV47 211 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 NFKBIZQ9BYH8 718 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 LRRC2Q9BYS8 371 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 RIMS4Q9H426 269 aaPredicted RBP4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 CALHM2Q9HA72 323 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 TRPC7Q9HCX4 862 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 KRCC1Q9NPI7 259 aaPredicted RBP4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 SEMA4GQ9NTN9 838 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 GTSE1Q9NYZ3 720 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 AMDHD2Q9Y303 409 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 SF3B1O75533 1304 aaKnown RBP eCLIP4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 ZMYM6O95789 1325 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 TTC21BQ7Z4L5 1316 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 ZCWPW2A0A1B0GU75 182 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 hDV102S1A0JD36 115 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 MFSD2BA6NFX1 497 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 LILRA5A6NI73 299 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 H3BMM5 538 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 CHUKO15111 745 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 ERLIN1O75477 346 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 GMNNO75496 209 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 GAGE7O76087 117 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 PAPSS2O95340 614 aaPredicted RBP4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 SYNGR4O95473 234 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 GAGE12FP0CL80 117 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 GAGE12GP0CL81 117 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 GAGE12IP0CL82 117 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 GP1BBP13224 206 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 TNNI3P19429 210 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 SLC1A6P48664 564 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 ACADVLP49748 655 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 NR0B1P51843 470 aaKnown RBP4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 MAZP56270 477 aaKnown RBP4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 HERV-K104P63124 156 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 MYBPC1Q00872 1141 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 ZNF91Q05481 1191 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 EFEMP1Q12805 493 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 KIF5AQ12840 1032 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 GAGE1Q13065 139 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 GAGE4Q13068 117 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 IFT88Q13099 833 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 MTX1Q13505 466 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 CDH18Q13634 790 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 GPR18Q14330 331 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 ZNF234Q14588 700 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 ZNF528Q3MIS6 628 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 GLIPR1L2Q4G1C9 344 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 AGKQ53H12 422 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 C20orf194Q5TEA3 1177 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 UGT3A1Q6NUS8 523 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 TTC27Q6P3X3 843 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 ZNF782Q6ZMW2 699 aaPredicted RBP4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 LCNL1Q6ZST4 164 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 ERASQ7Z444 233 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 CTU1Q7Z7A3 348 aaKnown RBP4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 TMEM139Q8IV31 216 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 LGI2Q8N0V4 545 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 GCNT2Q8N0V5 402 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 TMEM99Q8N816 258 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 GBP7Q8N8V2 638 aaPredicted RBP4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 TRPV3Q8NET8 790 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 OR6C4Q8NGE1 309 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 RLN3Q8WXF3 142 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 SUSD6Q92537 303 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 ABTB1Q969K4 478 aaPredicted RBP4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 MCHR2Q969V1 340 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 MRPL53Q96EL3 112 aaKnown RBP4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 SLC41A3Q96GZ6 507 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 ZNF48Q96MX3 618 aaPredicted RBP4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 ZMYND12Q9H0C1 365 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 COG4Q9H9E3 785 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 CRLF2Q9HC73 371 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 FZD3Q9NPG1 666 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 TMEM30AQ9NV96 361 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 AGO1Q9UL18 857 aaKnown RBP4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 FOXJ3Q9UPW0 622 aa4.85□□□□□ -1.63
TM9SF3-202ENST00000443638 IL16Q14005 1332 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 ANKRD61A6NGH8 418 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 ANKRD30BLA7E2S9 258 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 H0Y8G0 127 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 K7ESM1 405 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 LGALS8O00214 317 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 CYR61O00622 381 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 SYT7O43581 403 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 OR4F21O95013 312 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 CPNE6O95741 557 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 EPOP01588 193 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 FAM106CPP0CH98 169 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 ODC1P11926 461 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 ZNF20P17024 532 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 DPP4P27487 766 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms