RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 A0A1W2PQ09 198 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 EFCAB10A6NFE3 127 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 OR6C70A6NIJ9 312 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 FADS2P1A8MWK0 482 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 CDK2AP1O14519 115 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 PIRTP0C851 137 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 MYL9P24844 172 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 PTPN6P29350 595 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 S100A3P33764 101 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 CD83Q01151 205 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 ST3GAL4Q11206 333 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 TNK1Q13470 666 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 TAF1AQ15573 450 aaPredicted RBP11.48□□□□□ -0.57
LTBR-203ENST00000441074 ZNF79Q15937 498 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 C18orf21Q32NC0 220 aaPredicted RBP11.48□□□□□ -0.57
LTBR-203ENST00000441074 ESCO2Q56NI9 601 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 TIGD3Q6B0B8 471 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 SUSD1Q6UWL2 747 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 ANKS3Q6ZW76 656 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 ZNF551Q7Z340 670 aaPredicted RBP11.48□□□□□ -0.57
LTBR-203ENST00000441074 ZNF605Q86T29 641 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 SERPINA11Q86U17 422 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 ATCAYQ86WG3 371 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 TP53I13Q8NBR0 393 aaPredicted RBP11.48□□□□□ -0.57
LTBR-203ENST00000441074 CD200R1Q8TD46 325 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 IGSF8Q969P0 613 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 TRIB3Q96RU7 358 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 MGME1Q9BQP7 344 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 INPP5KQ9BT40 448 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 C12orf10Q9HB07 376 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 LRTM1Q9HBL6 345 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 CXXC1Q9P0U4 656 aaPredicted RBP11.48□□□□□ -0.57
LTBR-203ENST00000441074 KLHL21Q9UJP4 597 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 MICAL3Q7RTP6 2002 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 OR6C75A6NL08 312 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 STX7O15400 261 aaKnown RBP11.48□□□□□ -0.57
LTBR-203ENST00000441074 RGS5O15539 181 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 HOXA2O43364 376 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 NIPSNAP2O75323 286 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 POLR2CP19387 275 aaPredicted RBP11.48□□□□□ -0.57
LTBR-203ENST00000441074 KDELR2P33947 212 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 GZMKP49863 264 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 KCNQ1P51787 676 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 PPIGQ13427 754 aaKnown RBP eCLIP11.48□□□□□ -0.57
LTBR-203ENST00000441074 USP39Q53GS9 565 aaKnown RBP11.48□□□□□ -0.57
LTBR-203ENST00000441074 ZMAT1Q5H9K5 638 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 DOK6Q6PKX4 331 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 Q6ZPB1 254 aaPredicted RBP11.48□□□□□ -0.57
LTBR-203ENST00000441074 EIF3MQ7L2H7 374 aaKnown RBP11.48□□□□□ -0.57
LTBR-203ENST00000441074 TRIM46Q7Z4K8 759 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 VTCN1Q7Z7D3 282 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 SLC51BQ86UW2 128 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 DENND6BQ8NEG7 585 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 GPR151Q8TDV0 419 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 DEDD2Q8WXF8 326 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 MARVELD3Q96A59 401 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 FRMD6Q96NE9 622 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 RPRD1AQ96P16 312 aaPredicted RBP11.48□□□□□ -0.57
LTBR-203ENST00000441074 TTLL2Q9BWV7 592 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 NIPAL2Q9H841 368 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 PDFQ9HBH1 243 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 IL23AQ9NPF7 189 aa11.48□□□□□ -0.57
LTBR-203ENST00000441074 ARIH1Q9Y4X5 557 aaPredicted RBP11.48□□□□□ -0.57
LTBR-203ENST00000441074 TEX51A0A1B0GUA7 166 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 B4DXG7 233 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 NOS1APO75052 506 aaPredicted RBP11.47□□□□□ -0.57
LTBR-203ENST00000441074 ESR1P03372 595 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 OR1E1P30953 314 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 TUFMP49411 452 aaKnown RBP11.47□□□□□ -0.57
LTBR-203ENST00000441074 TTPAP49638 278 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 NUDT6P53370 316 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 CYP4F2P78329 520 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 HMGCS1Q01581 520 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 CSTF3Q12996 717 aaKnown RBP11.47□□□□□ -0.57
LTBR-203ENST00000441074 TSTQ16762 297 aaKnown RBP11.47□□□□□ -0.57
LTBR-203ENST00000441074 OR4F3Q6IEY1 312 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 CBLL1Q75N03 491 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 GLT6D1Q7Z4J2 308 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 GLRX5Q86SX6 157 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 DEPDC4Q8N2C3 294 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 FAM181AQ8N9Y4 354 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 HSH2DQ96JZ2 352 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 MGLLQ99685 303 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 TRAF4Q9BUZ4 470 aaPredicted RBP11.47□□□□□ -0.57
LTBR-203ENST00000441074 CDCA4Q9BXL8 241 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 BEX2Q9BXY8 128 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 RETREG1Q9H6L5 497 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 RNF121Q9H920 327 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 PRUNE2Q8WUY3 3088 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 C2orf81A6NN90 581 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 GFRA2O00451 464 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 SEC14L5O43304 696 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 GPX5O75715 221 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 WDR47O94967 919 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 GJB5O95377 273 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 BCKDHAP12694 445 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 GABRB1P18505 474 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 CLDN8P56748 225 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 HSPA14Q0VDF9 509 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 VMACQ2NL98 169 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms