RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CTSCP53634 463 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 PNLIPRP1P54315 467 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 POLE2P56282 527 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 NUP107P57740 925 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 GABARAPL2P60520 117 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 NFYCQ13952 458 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 BOP1Q14137 746 aaKnown RBP4.59□□□□□ -1.68
EDEM3-203ENST00000439962 GK3PQ14409 553 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 NFE2L1Q14494 772 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 GBX1Q14549 363 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 ELOCQ15369 112 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 TGFBIQ15582 683 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 PPP1R3AQ16821 1122 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 RFX4Q33E94 735 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 ZC3H12BQ5HYM0 836 aaKnown RBP4.59□□□□□ -1.68
EDEM3-203ENST00000439962 TBCELQ5QJ74 424 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 C6orf136Q5SQH8 315 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 ATG9BQ674R7 924 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 KRT80Q6KB66 452 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 HMBOX1Q6NT76 420 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 NEK5Q6P3R8 708 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 USP51Q70EK9 711 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 PATL1Q86TB9 770 aaKnown RBP4.59□□□□□ -1.68
EDEM3-203ENST00000439962 SYVN1Q86TM6 617 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 PIM3Q86V86 326 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 RETREG3Q86VR2 466 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 DDIASQ8IXT1 998 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 OR10G6Q8NH81 332 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 ZDHHC1Q8WTX9 485 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 LINGO1Q96FE5 620 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 AHCYL2Q96HN2 611 aaKnown RBP4.59□□□□□ -1.68
EDEM3-203ENST00000439962 HIC2Q96JB3 615 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 MAGED4Q96JG8 741 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 C3orf30Q96M34 536 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 DOK1Q99704 481 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 KCTD14Q9BQ13 255 aaPredicted RBP4.59□□□□□ -1.68
EDEM3-203ENST00000439962 NUDT22Q9BRQ3 303 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 TNFRSF12AQ9NP84 129 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 IL26Q9NPH9 171 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 SMOXQ9NWM0 555 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 CMTM6Q9NX76 183 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 TAAR2Q9P1P5 351 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 TBC1D29Q9UFV1 150 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 EIF3LQ9Y262 564 aaKnown RBP4.59□□□□□ -1.68
EDEM3-203ENST00000439962 MAN2B2Q9Y2E5 1009 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 RNF215Q9Y6U7 377 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 IGLV3-16A0A075B6K0 115 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 GLYATL1P3A0A0U1RQE8 302 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 BTN3A1O00481 513 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 ANKRD28O15084 1053 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 OR1I1O60431 355 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 DEAF1O75398 565 aaPredicted RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 ERN1O75460 977 aaKnown RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 GMNNO75496 209 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 AP2A2O94973 939 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 SOD1P00441 154 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 LDLRP01130 860 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 C8GP07360 202 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 GSTM1P09488 218 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 RAP2AP10114 183 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 CKMT2P17540 419 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 ATP6V1B2P21281 511 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 SDHBP21912 280 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 FMO4P31512 558 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 CAPGP40121 348 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 PREPP48147 710 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 GSK3BP49841 420 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 DCDC1P59894 354 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 CCL7P80098 99 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 GSTM4Q03013 218 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 MERTKQ12866 999 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 SPIDRQ14159 915 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 KRT33BQ14525 404 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 PLCL1Q15111 1095 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 TGIF1Q15583 401 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 TSNQ15631 228 aaKnown RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 ZBED5Q49AG3 693 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 TMEM52BQ4KMG9 183 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 COLEC12Q5KU26 742 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 RBM48Q5RL73 367 aaKnown RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 CLEC6AQ6EIG7 209 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 TMEM220Q6QAJ8 160 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 ABRAXAS1Q6UWZ7 409 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 FRA10AC1Q70Z53 315 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 RASGRP3Q8IV61 690 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 TRIM48Q8IWZ4 208 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 FAM20CQ8IXL6 584 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 RIMKLAQ8IXN7 391 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 EID3Q8N140 333 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 PHC3Q8NDX5 983 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 LRTOMTQ8WZ04 291 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 USP7Q93009 1102 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 AURKBQ96GD4 344 aaPredicted RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 FCRL1Q96LA6 429 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 COQ10AQ96MF6 247 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 PRM3Q9NNZ6 103 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 KCTD5Q9NXV2 234 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 SMPD3Q9NY59 655 aaPredicted RBP4.58□□□□□ -1.68
EDEM3-203ENST00000439962 CD274Q9NZQ7 290 aa4.58□□□□□ -1.68
EDEM3-203ENST00000439962 RSL24D1Q9UHA3 163 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms