RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 CDK15Q96Q40 435 aa16.09■□□□□ 0.17
TARDBP-203ENST00000439080 SLC17A7Q9P2U7 560 aa16.09■□□□□ 0.17
TARDBP-203ENST00000439080 MAU2Q9Y6X3 613 aa16.09■□□□□ 0.17
TARDBP-203ENST00000439080 EPG5Q9HCE0 2579 aa16.09■□□□□ 0.17
TARDBP-203ENST00000439080 CPA3P15088 417 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 TSPAN8P19075 237 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 WT1P19544 449 aaPredicted RBP16.08■□□□□ 0.16
TARDBP-203ENST00000439080 IMPDH1P20839 514 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 F8A1P23610 371 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 HNF4AP41235 474 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 OR1D4P47884 311 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 CDH13P55290 713 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 TMPRSS3P57727 454 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 CLCQ05315 142 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 NCF4Q15080 339 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 HIST2H2ACQ16777 129 aaPredicted RBP16.08■□□□□ 0.16
TARDBP-203ENST00000439080 UNC50Q53HI1 259 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 ARHGAP40Q5TG30 622 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 LIPJQ5W064 366 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 HIST2H2AA3Q6FI13 130 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 MED27Q6P2C8 311 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 PRMT9Q6P2P2 845 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 COX15Q7KZN9 410 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 VN1R5Q7Z5H4 357 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 ENDOVQ8N8Q3 282 aaKnown RBP16.08■□□□□ 0.16
TARDBP-203ENST00000439080 CREB3L4Q8TEY5 395 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 CCT6BQ92526 530 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 UBE2E3Q969T4 207 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 MVB12AQ96EY5 273 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 SEC16BQ96JE7 1060 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 C17orf62Q9BQA9 187 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 EFHD1Q9BUP0 239 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 SLC6A16Q9GZN6 736 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 STMN4Q9H169 189 aaPredicted RBP16.08■□□□□ 0.16
TARDBP-203ENST00000439080 IFT80Q9P2H3 777 aaPredicted RBP16.08■□□□□ 0.16
TARDBP-203ENST00000439080 IL17BQ9UHF5 180 aa16.08■□□□□ 0.16
TARDBP-203ENST00000439080 ZNF490Q9ULM2 529 aaPredicted RBP16.08■□□□□ 0.16
TARDBP-203ENST00000439080 MRPS18BQ9Y676 258 aaKnown RBP16.08■□□□□ 0.16
TARDBP-203ENST00000439080 PTPRQQ9UMZ3 2332 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 A0A0A6YYC8 382 aaPredicted RBP16.07■□□□□ 0.16
TARDBP-203ENST00000439080 ANKDD1BA6NHY2 528 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 I3L1I5 382 aaPredicted RBP16.07■□□□□ 0.16
TARDBP-203ENST00000439080 CLEC3AO75596 197 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 CLDN9O95484 217 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 OTCP00480 354 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 CAPN1P07384 714 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 PCNAP12004 261 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 IL1RNP18510 177 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 UCNP55089 124 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 HYAL2Q12891 473 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 FAM53BQ14153 422 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 LIPMQ5VYY2 423 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 PRSS41Q7RTY9 318 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 C10orf107Q8IVU9 208 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 LAS2Q8IYD9 372 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 L3MBTL4Q8NA19 623 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 TRPC4APQ8TEL6 797 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 STARD8Q92502 1023 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 NTMT1Q9BV86 223 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 RHBGQ9H310 441 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 ACTL8Q9H568 366 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 CPNE5Q9HCH3 593 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 PRM3Q9NNZ6 103 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 SSU72Q9NP77 194 aaKnown RBP16.07■□□□□ 0.16
TARDBP-203ENST00000439080 SLC22A11Q9NSA0 550 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 OXSMQ9NWU1 459 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 GPN3Q9UHW5 284 aaPredicted RBP16.07■□□□□ 0.16
TARDBP-203ENST00000439080 KCND3Q9UK17 655 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 RNF11Q9Y3C5 154 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 ACTL7BQ9Y614 415 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 NBEAQ8NFP9 2946 aa16.07■□□□□ 0.16
TARDBP-203ENST00000439080 A0A1B0GTL3 188 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 PPP6CO00743 305 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 FOXS1O43638 330 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 SERPINA6P08185 405 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 RAB40ALP0C0E4 278 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 ZNF888P0CJ79 500 aaPredicted RBP16.06■□□□□ 0.16
TARDBP-203ENST00000439080 FBLP22087 321 aaKnown RBP16.06■□□□□ 0.16
TARDBP-203ENST00000439080 DNAJB13P59910 316 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 RPS18P62269 152 aaKnown RBP16.06■□□□□ 0.16
TARDBP-203ENST00000439080 RPS15P62841 145 aaKnown RBP16.06■□□□□ 0.16
TARDBP-203ENST00000439080 LCP2Q13094 533 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 DSG2Q14126 1118 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 CPSF6Q16630 551 aaKnown RBP eCLIP16.06■□□□□ 0.16
TARDBP-203ENST00000439080 GGTA1PQ4G0N0 100 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 TOR1AIP1Q5JTV8 583 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 LETMD1Q6P1Q0 360 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 CCDC81Q6ZN84 652 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 ABHD13Q7L211 337 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 HDXQ7Z353 690 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 PDSS2Q86YH6 399 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 CCNYL1Q8N7R7 359 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 OR7G3Q8NG95 312 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 OR4F6Q8NGB9 312 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 OR9A4Q8NGU2 314 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 COL26A1Q96A83 441 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 FKBP10Q96AY3 582 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 MMABQ96EY8 250 aaPredicted RBP16.06■□□□□ 0.16
TARDBP-203ENST00000439080 GPR87Q9BY21 358 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 AICDAQ9GZX7 198 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms