RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 KRTAP10-8P60410 259 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 TFAP4Q01664 338 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 CDR2Q01850 454 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 GFPT1Q06210 699 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 LGALS3BPQ08380 585 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 LRMPQ12912 555 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 GPR17Q13304 367 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 HTR4Q13639 388 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 GPNMBQ14956 572 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 MEP1AQ16819 746 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 C2CD6Q53TS8 623 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 BEND3Q5T5X7 828 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 ZDHHC20Q5W0Z9 365 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 KLC3Q6P597 504 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 TSPAN33Q86UF1 283 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 CEP97Q8IW35 865 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 LINC00612Q8N6U2 182 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 TMEM116Q8NCL8 245 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 AFAP1L1Q8TED9 768 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 HPSE2Q8WWQ2 592 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 OMA1Q96E52 524 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 ZNF578Q96N58 590 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 SCLT1Q96NL6 688 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 CLEC7AQ9BXN2 247 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 PAIP1Q9H074 479 aaKnown RBP2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 UPF3AQ9H1J1 476 aaKnown RBP2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 DENND2DQ9H6A0 471 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 INTS9Q9NV88 658 aaKnown RBP2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 TRMT1Q9NXH9 659 aaKnown RBP2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 EPS15L1Q9UBC2 864 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 DBF4Q9UBU7 674 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 MYH7BA7E2Y1 1941 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 SEC16AO15027 2179 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 SACSQ9NZJ4 4579 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 ATP6V0E1O15342 81 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 TMCC2O75069 709 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 KHDRBS3O75525 346 aaKnown RBP2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 HIST1H2ABP04908 130 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 RBMY1A1P0DJD3 496 aaKnown RBP2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 XBP1P17861 261 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 HIST1H2ADP20671 130 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 CA8P35219 290 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 HNF4AP41235 474 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 PIK3CAP42336 1068 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 MAGEA11P43364 429 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 METAP1P53582 386 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 GAGE2BQ13066 116 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 PRKAA1Q13131 559 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 PEX6Q13608 980 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 RAPSNQ13702 412 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 KARSQ15046 597 aaKnown RBP2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 SGSM1Q2NKQ1 1148 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 GAGE2EQ4V326 116 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 GAGE2AQ6NT46 116 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 CORO6Q6QEF8 472 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 IL27RAQ6UWB1 636 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 HIST3H2AQ7L7L0 130 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 LRRTM1Q86UE6 522 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 HACE1Q8IYU2 909 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 LSMEM2Q8N112 164 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 RAB42Q8N4Z0 105 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 METTL6Q8TCB7 284 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 TRPC4APQ8TEL6 797 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 ZMYND19Q96E35 227 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 SGF29Q96ES7 293 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 FOXC2Q99958 501 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 CXXC4Q9H2H0 198 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 ADNPQ9H2P0 1102 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 HEBP1Q9NRV9 189 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 GAGE2DQ9UEU5 116 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 TSPYL4Q9UJ04 414 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 LRRFIP2Q9Y608 721 aaKnown RBP2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 RNF213Q63HN8 5207 aa2.41□□□□□ -2.02
HMGB1P18-201ENST00000438801 PCDH15Q96QU1 1955 aa2.4□□□□□ -2.02
HMGB1P18-201ENST00000438801 HIDE1A8MVS5 230 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 KPNA7A9QM74 516 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 IFRD1O00458 451 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 CNMDO75829 334 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 SPARCP09486 303 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 ACP2P11117 423 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 UGT1A4P22310 534 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 ACADLP28330 430 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 PBX3P40426 434 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 MSH2P43246 934 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 TUBP50607 506 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 IST1P53990 364 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 RPS8P62241 208 aaKnown RBP2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 GOLGA8DPQ0D2H9 430 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 NECTIN1Q15223 517 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 DCAF10Q5QP82 559 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 ZNF343Q6P1L6 599 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 CYP20A1Q6UW02 462 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 RSRC2Q7L4I2 434 aaKnown RBP2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 ZNF554Q86TJ5 538 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 GALNT13Q8IUC8 556 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 OR1J1Q8NGS3 322 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 MORC4Q8TE76 937 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 GATAD1Q8WUU5 269 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 HSD17B8Q92506 261 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms