RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 ARL2BPQ9Y2Y0 163 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 CCL27Q9Y4X3 112 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 ENTPD2Q9Y5L3 495 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 KMT2EQ8IZD2 1858 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 ATP6AP2A0A1C7CYW4 349 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 GSAPA4D1B5 854 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 TRPC5OSA6NMA1 111 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 C2orf74A8MZ97 194 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 DLL1O00548 723 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 CDX4O14627 284 aaPredicted RBP6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 LCE2BO14633 110 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 CASC3O15234 703 aaKnown RBP6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 TNFSF14O43557 240 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 NRP2O60462 931 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 ULK1O75385 1050 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 CLEC3AO75596 197 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 ATP6AP2O75787 350 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 CHEK2O96017 543 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 PDYNP01213 254 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 PROS1P07225 676 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 ZNF883P0CG24 379 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 ALPPL2P10696 532 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 EPHA3P29320 983 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 ALDH4A1P30038 563 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 CMPK1P30085 196 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 HMOX2P30519 316 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 NBL1P41271 181 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 GRIA3P42263 894 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 CCR8P51685 355 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 OR1D5P58170 312 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 CFHR1Q03591 330 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 BIRC2Q13490 618 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 LAPTM5Q13571 262 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 NR1D2Q14995 579 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 NR0B2Q15466 257 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 LSM12Q3MHD2 195 aaKnown RBP6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 TM4SF20Q53R12 229 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 XKR7Q5GH72 579 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 NKAIN2Q5VXU1 208 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 FRG2Q64ET8 278 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 ZNF425Q6IV72 752 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 MED27Q6P2C8 311 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 RNF165Q6ZSG1 346 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 Q6ZSR9 355 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 LARP4Q71RC2 724 aaKnown RBP eCLIP6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 EFL1Q7Z2Z2 1120 aaKnown RBP6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 TRIM73Q86UV7 250 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 C17orf64Q86WR6 236 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 OOSP2Q86WS3 158 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 DDIASQ8IXT1 998 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 LAS2Q8IYD9 372 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 RNF175Q8N4F7 328 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 AFAP1L2Q8N4X5 818 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 ANKS4BQ8N8V4 417 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 CCDC197Q8NCU1 140 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 OR7G3Q8NG95 312 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 UBASH3BQ8TF42 649 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 STON2Q8WXE9 905 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 ATOH1Q92858 354 aaPredicted RBP6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 SLC22A18Q96BI1 424 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 MTFMTQ96DP5 389 aaKnown RBP6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 C19orf60Q96EN9 201 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 MAGEB10Q96LZ2 347 aaPredicted RBP6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 FRG2BQ96QU4 278 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 HBEGFQ99075 208 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 DPH7Q9BTV6 452 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 EFCAB11Q9BUY7 163 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 ABCG4Q9H172 646 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 ELOVL6Q9H5J4 265 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 STN1Q9H668 368 aaKnown RBP6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 NT5DC2Q9H857 520 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 AKTIPQ9H8T0 292 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 SYNPO2LQ9H987 977 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 MRPS30Q9NP92 439 aaKnown RBP6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 RXFP3Q9NSD7 469 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 TMEM184CQ9NVA4 438 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 FAM86C1Q9NVL1 165 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 HEY2Q9UBP5 337 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 GIMAP2Q9UG22 337 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 SNX7Q9UNH6 387 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 SNX6Q9UNH7 406 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 APOBEC2Q9Y235 224 aaKnown RBP6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 BTBD3Q9Y2F9 522 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 PCDHGB2Q9Y5G2 931 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 LRP4O75096 1905 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 VCANP13611 3396 aa6.74□□□□□ -1.33
LSM3P3-201ENST00000436601 DOCK9Q9BZ29 2069 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 IGHV1OR21-1A0A087WYE8 117 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 FEZF1A0PJY2 475 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 CPED1A4D0V7 1026 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 EME2A4GXA9 379 aaPredicted RBP6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 SHISA8B8ZZ34 492 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 SLC28A1O00337 649 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 HAT1O14929 419 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 HGSO14964 777 aaPredicted RBP6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 RRP9O43818 475 aaKnown RBP6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 LCMT2O60294 686 aaKnown RBP6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 PRAMEF10O60809 474 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 UBOX5O94941 541 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 CCNDBP1O95273 360 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms