RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 TGM5O43548 720 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 TYRP14679 529 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 OTX2P32243 289 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 ZNF81P51508 661 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 KLF10Q13118 480 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 CLEC6AQ6EIG7 209 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 ZNF610Q8N9Z0 462 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 OR2AP1Q8NGE2 309 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 ADAMTS18Q8TE60 1221 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 PURBQ96QR8 312 aaKnown RBP10.86□□□□□ -0.67
SCN4A-201ENST00000435607 MECRQ9BV79 373 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 TREM1Q9NP99 234 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 COMMD3Q9UBI1 195 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 SRRDQ9UH36 339 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 MT-CO2P00403 227 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 PSKH1P11801 424 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 UQCRC1P31930 480 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 NFE2L1Q14494 772 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 GLT8D1Q68CQ7 371 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 ALYREFQ86V81 257 aaKnown RBP10.86□□□□□ -0.67
SCN4A-201ENST00000435607 OR4K14Q8NGD5 310 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 TIMMDC1Q9NPL8 285 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 KLHL13Q9P2N7 655 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 MMP20O60882 483 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 GLDCP23378 1020 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 TPRG1LQ5T0D9 272 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 ISLR2Q6UXK2 745 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 LBX2Q6XYB7 198 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 RNF111Q6ZNA4 994 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 DPY19L3Q6ZPD9 716 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 ASB15Q8WXK1 588 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 BMFQ96LC9 184 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 CDH22Q9UJ99 828 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 PDE10AQ9Y233 779 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 E7ENX8 843 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 FGF18O76093 207 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 IFNA10P01566 189 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 NTRK3Q16288 839 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 MYLK3Q32MK0 819 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 OR5K1Q8NHB7 308 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 SHKBP1Q8TBC3 707 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 FZD3Q9NPG1 666 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 GSKIPQ9P0R6 139 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 FNIP2Q9P278 1114 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 VSTM2BA6NLU5 285 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 USP2O75604 605 aaPredicted RBP10.86□□□□□ -0.67
SCN4A-201ENST00000435607 DAOAP59103 153 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 ERVK-16P61578 105 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 GRM2Q14416 872 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 PDSS2Q86YH6 399 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 SYT17Q9BSW7 474 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 MEAF6Q9HAF1 191 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 SH2B3Q9UQQ2 575 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 A0A087WUU8 490 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 HCRTR2O43614 444 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 KLF8O95600 359 aaPredicted RBP10.86□□□□□ -0.67
SCN4A-201ENST00000435607 RAP2AP10114 183 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 SOX9P48436 509 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 AFF1P51825 1210 aaKnown RBP10.86□□□□□ -0.67
SCN4A-201ENST00000435607 DSC3Q14574 896 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 RAB12Q6IQ22 244 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 NLGN2Q8NFZ4 835 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 LENG1Q96BZ8 264 aaPredicted RBP10.86□□□□□ -0.67
SCN4A-201ENST00000435607 PGAM5Q96HS1 289 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 TUBA8Q9NY65 449 aaPredicted RBP10.86□□□□□ -0.67
SCN4A-201ENST00000435607 FARSAQ9Y285 508 aaKnown RBP10.86□□□□□ -0.67
SCN4A-201ENST00000435607 J3QLW9 94 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 DLDP09622 509 aaKnown RBP10.86□□□□□ -0.67
SCN4A-201ENST00000435607 ZNF19P17023 458 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 GCH1P30793 250 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 TPTEP56180 551 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 POU6F2P78424 691 aaPredicted RBP10.86□□□□□ -0.67
SCN4A-201ENST00000435607 FLYWCH1Q4VC44 716 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 CATSPEREQ5SY80 951 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 FRG2Q64ET8 278 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 HMBOX1Q6NT76 420 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 KIAA0907Q7Z7F0 614 aaPredicted RBP10.86□□□□□ -0.67
SCN4A-201ENST00000435607 TOMM5Q8N4H5 51 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 PTCHD1Q96NR3 888 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 FRG2BQ96QU4 278 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 MND1Q9BWT6 205 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 GPR25O00155 361 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 BCAS2O75934 225 aaPredicted RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 IFNA7P01567 189 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 MLLT6P55198 1093 aaPredicted RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 FBXL16Q8N461 479 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 CLEC1AQ8NC01 280 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 OR10G2Q8NGC3 310 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 CCNL2Q96S94 520 aaPredicted RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 CPXM1Q96SM3 734 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 RAD9AQ99638 391 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 EIF2B3Q9NR50 452 aaKnown RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 EURLQ9NYK6 297 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 ACAD8Q9UKU7 415 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 BANF1O75531 89 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 APOL3O95236 402 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 F8A1P23610 371 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 DDR1Q08345 913 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 PITRM1Q5JRX3 1037 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 C10orf62Q5T681 223 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms