RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 FEVQ99581 238 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 LINC00597Q9H2U6 94 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 PRDM8Q9NQV8 689 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 GPATCH2Q9NW75 528 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 NDUFAF4Q9P032 175 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 EXO1Q9UQ84 846 aaKnown RBP11.37□□□□□ -0.59
CD44-209ENST00000433892 RNF6Q9Y252 685 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 PCDHGB3Q9Y5G1 929 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 OR2A25A4D2G3 310 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 KRBA1A5PL33 1030 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 SAP18O00422 153 aaKnown RBP11.36□□□□□ -0.59
CD44-209ENST00000433892 CCL16O15467 120 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 LILRB3O75022 631 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 SERPINB7O75635 380 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 TYRP14679 529 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 TIMP2P16035 220 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 LAG3P18627 525 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 PCGF2P35227 344 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 TGFBR2P37173 567 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 TLE2Q04725 743 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 ZNF385BQ569K4 471 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 ANXA8L1Q5VT79 327 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 CNKSR3Q6P9H4 555 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 OTOP2Q7RTS6 562 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 TMPRSS11BQ86T26 416 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 TRIM74Q86UV6 250 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 TRIM73Q86UV7 250 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 TRAM1L1Q8N609 369 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 ZBTB8BQ8NAP8 495 aaPredicted RBP11.36□□□□□ -0.59
CD44-209ENST00000433892 C11orf65Q8NCR3 313 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 OR6Q1Q8NGQ2 317 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 BTN2A2Q8WVV5 523 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 IPCEF1Q8WWN9 437 aaPredicted RBP11.36□□□□□ -0.59
CD44-209ENST00000433892 PROX1Q92786 737 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 COQ8BQ96D53 544 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 HEPHQ9BQS7 1158 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 COPS4Q9BT78 406 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 BTBD2Q9BX70 525 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 MROQ9BYG7 248 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 RLIMQ9NVW2 624 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 PADI2Q9Y2J8 665 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 LYVE1Q9Y5Y7 322 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 KIAA1671Q9BY89 1806 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 CHD7Q9P2D1 2997 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 DENND4CQ5VZ89 1909 aa11.36□□□□□ -0.59
CD44-209ENST00000433892 CXorf51AA0A1B0GTR3 108 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 WASH3PC4AMC7 463 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 TNFRSF11BO00300 401 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 NPC1O15118 1278 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 ATG13O75143 517 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 ATP6V1G1O75348 118 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 HLA-EP13747 358 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 HSD3B1P14060 373 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 HSD3B2P26439 372 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 TIA1P31483 386 aaKnown RBP eCLIP11.35□□□□□ -0.59
CD44-209ENST00000433892 DCDC1P59894 354 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 SELENOWP63302 87 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 HBA1P69905 142 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 CD300CQ08708 224 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 HIST2H2ACQ16777 129 aaPredicted RBP11.35□□□□□ -0.59
CD44-209ENST00000433892 ZNF284Q2VY69 593 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 CYP27C1Q4G0S4 372 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 SPIN4Q56A73 249 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 PRSS36Q5K4E3 855 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 CATSPEREQ5SY80 951 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 PAGE2Q7Z2X7 111 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 PLD3Q8IV08 490 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 SLC5A8Q8N695 610 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 TCEAL4Q96EI5 215 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 CAPNS2Q96L46 248 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 SIGLEC11Q96RL6 698 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 ZSCAN5AQ9BUG6 496 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 SPATA9Q9BWV2 254 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 GABARAPL3Q9BY60 117 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 SLIRPQ9GZT3 109 aaKnown RBP11.35□□□□□ -0.59
CD44-209ENST00000433892 FBXO8Q9NRD0 319 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.35□□□□□ -0.59
CD44-209ENST00000433892 CORO2BQ9UQ03 480 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 SLC5A10A0PJK1 596 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 EFCAB9A8MZ26 197 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 E9PQ18 207 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 DPM1O60762 260 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 ADAM23O75077 832 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 CTSLP07711 333 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 PPIBP23284 216 aaKnown RBP11.35□□□□□ -0.59
CD44-209ENST00000433892 WEE1P30291 646 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 LIPAP38571 399 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 MVDP53602 400 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 MC1RQ01726 317 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 TMEM115Q12893 351 aaPredicted RBP11.35□□□□□ -0.59
CD44-209ENST00000433892 FOXD4Q12950 439 aaPredicted RBP11.35□□□□□ -0.59
CD44-209ENST00000433892 PPIGQ13427 754 aaKnown RBP eCLIP11.35□□□□□ -0.59
CD44-209ENST00000433892 DNASE1L3Q13609 305 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 TRIM60Q495X7 471 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 TMEM220Q6QAJ8 160 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 SLCO4C1Q6ZQN7 724 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 LINC00299Q6ZSB3 139 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 CAMKMTQ7Z624 323 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 OR56A3Q8NH54 315 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 GLYATL1Q969I3 302 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms