RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 AP1M2Q9Y6Q5 423 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 MDC1Q14676 2089 aaKnown RBP17.44■□□□□ 0.38
HMGN1-206ENST00000431390 CABIN1Q9Y6J0 2220 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 SEMA3DO95025 777 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 TGFB1P01137 390 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 G6PDP11413 515 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 MAGP20916 626 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 BCL6P41182 706 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 NCALDP61601 193 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 AGKQ53H12 422 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 PAOXQ6QHF9 649 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 FIGLAQ6QHK4 219 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 TRIM73Q86UV7 250 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 GATAD2AQ86YP4 633 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 FAM181AQ8N9Y4 354 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 MFSD9Q8NBP5 474 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 DEFB124Q8NES8 71 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 THAP11Q96EK4 314 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 APOLD1Q96LR9 279 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 CCDC167Q9P0B6 97 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 PCDHGA4Q9Y5G9 962 aa17.44■□□□□ 0.38
HMGN1-206ENST00000431390 ARID1BQ8NFD5 2236 aaPredicted RBP17.43■□□□□ 0.38
HMGN1-206ENST00000431390 SPEGQ15772 3267 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 BAHCC1Q9P281 2608 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 PCDHGA12O60330 932 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 MYO1DO94832 1006 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 BCKDHAP12694 445 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 DMTNQ08495 405 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 CYLC2Q14093 348 aaPredicted RBP17.43■□□□□ 0.38
HMGN1-206ENST00000431390 DEPDC1Q5TB30 811 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 KHDRBS2Q5VWX1 349 aaKnown RBP17.43■□□□□ 0.38
HMGN1-206ENST00000431390 FCRL6Q6DN72 434 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 NOXRED1Q6NXP6 359 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 GALNT18Q6P9A2 607 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 SNX32Q86XE0 403 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 PLD3Q8IV08 490 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 METTL4Q8N3J2 472 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 LIX1Q8N485 282 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 TRPV3Q8NET8 790 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 BAHD1Q8TBE0 780 aaPredicted RBP17.43■□□□□ 0.38
HMGN1-206ENST00000431390 CREB3L4Q8TEY5 395 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 TSPEARQ8WU66 669 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 GATA6Q92908 595 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 MRPL1Q9BYD6 325 aaKnown RBP17.43■□□□□ 0.38
HMGN1-206ENST00000431390 ABCG4Q9H172 646 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 OR51B5Q9H339 312 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 EVA1BQ9NVM1 165 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 EPHA6Q9UF33 1036 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 PADI4Q9UM07 663 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 KLHL20Q9Y2M5 609 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 IGF2RP11717 2491 aa17.43■□□□□ 0.38
HMGN1-206ENST00000431390 ASPMQ8IZT6 3477 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 LOC100653049A0A140TA62 436 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 ANKRD28O15084 1053 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 NRP2O60462 931 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 SLC22A3O75751 556 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 KRT34O76011 436 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 TBX6O95947 436 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-206ENST00000431390 PNLIPP16233 465 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 JAK1P23458 1154 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 LSSP48449 732 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 CYP4F2P78329 520 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 ZIC1Q15915 447 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 GK5Q6ZS86 529 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 FUNDC1Q8IVP5 155 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 C1orf52Q8N6N3 182 aaKnown RBP17.42■□□□□ 0.38
HMGN1-206ENST00000431390 POU5F2Q8N7G0 328 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 OR9I1Q8NGQ6 314 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 PROKR1Q8TCW9 393 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 SLC7A6OSQ96CW6 309 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-206ENST00000431390 SLC25A23Q9BV35 468 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 SEMA6CQ9H3T2 930 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 AHSPQ9NZD4 102 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 DLGAP4Q9Y2H0 992 aa17.42■□□□□ 0.38
HMGN1-206ENST00000431390 PCNX2A6NKB5 2137 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 TRIM38O00635 465 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 SNRPB2P08579 225 aaKnown RBP17.41■□□□□ 0.38
HMGN1-206ENST00000431390 PTPN4P29074 926 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 NME5P56597 212 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 UFM1P61960 85 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 PPP1CAP62136 330 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 GPLD1P80108 840 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 STX5Q13190 355 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 NR0B2Q15466 257 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 FBXO42Q6P3S6 717 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 CD180Q99467 661 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 CENPKQ9BS16 269 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 LRMDAQ9H2I8 198 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 ACTL8Q9H568 366 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 C1GALT1Q9NS00 363 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 PILRAQ9UKJ1 303 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 ZZEF1O43149 2961 aa17.41■□□□□ 0.38
HMGN1-206ENST00000431390 IGHV1OR21-1A0A087WYE8 117 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 FAM234BA2RU67 622 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 TMEM8BA6NDV4 472 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 SH3BGRLO75368 114 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 ZNF883P0CG24 379 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 ENGP17813 658 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 SDC1P18827 310 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 CDH3P22223 829 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms