RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 ZNF808Q8N4W9 903 aaPredicted RBP13.09□□□□□ -0.31
SEC13-211ENST00000431352 MFSD9Q8NBP5 474 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 C2CD4AQ8NCU7 369 aaPredicted RBP13.09□□□□□ -0.31
SEC13-211ENST00000431352 ZNF740Q8NDX6 193 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 MDS2Q8NDY4 140 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 TM4SF19Q96DZ7 209 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 PHF12Q96QT6 1004 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 LPAR4Q99677 370 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 SGPP1Q9BX95 441 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 ARL15Q9NXU5 204 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 TAS2R13Q9NYV9 303 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 NEU2Q9Y3R4 380 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 KLF2Q9Y5W3 355 aaPredicted RBP13.09□□□□□ -0.31
SEC13-211ENST00000431352 APCP25054 2843 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 TEP1Q99973 2627 aaKnown RBP13.08□□□□□ -0.32
SEC13-211ENST00000431352 NPIPA5E9PKD4 350 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 PGRMC1O00264 195 aaKnown RBP13.08□□□□□ -0.32
SEC13-211ENST00000431352 B4GALT2O60909 372 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 GUCA1CO95843 209 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 HIST1H2AGP0C0S8 130 aaPredicted RBP13.08□□□□□ -0.32
SEC13-211ENST00000431352 ZNF888P0CJ79 500 aaPredicted RBP13.08□□□□□ -0.32
SEC13-211ENST00000431352 COX6B1P14854 86 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 CD46P15529 392 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 HIST1H2ADP20671 130 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 CCND1P24385 295 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 ELAVL4P26378 380 aaKnown RBP13.08□□□□□ -0.32
SEC13-211ENST00000431352 TAS2R50P59544 299 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 ADORA2A-AS1P86434 159 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 CCZ1BP86790 482 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 CCZ1P86791 482 aaPredicted RBP13.08□□□□□ -0.32
SEC13-211ENST00000431352 PDAP1Q13442 181 aaKnown RBP13.08□□□□□ -0.32
SEC13-211ENST00000431352 USP10Q14694 798 aaKnown RBP13.08□□□□□ -0.32
SEC13-211ENST00000431352 PPP1R7Q15435 360 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.08□□□□□ -0.326e-6■□□□□ 8.6
SEC13-211ENST00000431352 LCTLQ6UWM7 567 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 NCCRP1Q6ZVX7 275 aaPredicted RBP13.08□□□□□ -0.32
SEC13-211ENST00000431352 LRRC8AQ8IWT6 810 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 PPIL6Q8IXY8 311 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 KIF2BQ8N4N8 673 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 SLC5A8Q8N695 610 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 GPATCH11Q8N954 259 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 M1APQ8TC57 530 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 PBKQ96KB5 322 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 HIST1H2AHQ96KK5 128 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 GPR137Q96N19 417 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 TSNARE1Q96NA8 513 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 HIST1H2AJQ99878 128 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 H2AFJQ9BTM1 129 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 MMP25Q9NPA2 562 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 PPANQ9NQ55 473 aaKnown RBP13.08□□□□□ -0.32
SEC13-211ENST00000431352 LANCL2Q9NS86 450 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 NPIPA1Q9UND3 350 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 SLC22A7Q9Y694 548 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 SCN2AQ99250 2005 aa13.08□□□□□ -0.32
SEC13-211ENST00000431352 MAGEB17A8MXT2 336 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 NDC80O14777 642 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 SLC16A5O15375 505 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 DNAJB6O75190 326 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 FHP07954 510 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 NPPBP16860 134 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 GABRB3P28472 473 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 HNF4AP41235 474 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 SLC26A5P58743 744 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 HSF1Q00613 529 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 HERC3Q15034 1050 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 CYP1B1Q16678 543 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 ZNF630Q2M218 657 aaPredicted RBP13.07□□□□□ -0.32
SEC13-211ENST00000431352 HP1BP3Q5SSJ5 553 aaPredicted RBP13.07□□□□□ -0.32
SEC13-211ENST00000431352 RNASEH2BQ5TBB1 312 aaKnown RBP13.07□□□□□ -0.32
SEC13-211ENST00000431352 H3F3CQ6NXT2 135 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 GDF7Q7Z4P5 450 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 GALNTL5Q7Z4T8 443 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.07□□□□□ -0.32
SEC13-211ENST00000431352 TMEM178AQ8NBL3 297 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 TBC1D20Q96BZ9 403 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 CFAP36Q96G28 342 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 FRMD6Q96NE9 622 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 OR1F2PQ96R84 312 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 NAP1L3Q99457 506 aaPredicted RBP13.07□□□□□ -0.32
SEC13-211ENST00000431352 HAUS8Q9BT25 410 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 SPNS1Q9H2V7 528 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 CDCP1Q9H5V8 836 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 ASIC3Q9UHC3 531 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 JRKLQ9Y4A0 524 aa13.07□□□□□ -0.32
SEC13-211ENST00000431352 FBN2P35556 2912 aa13.06□□□□□ -0.32
SEC13-211ENST00000431352 GOLGA6L10A0A0M3HER8 536 aa13.06□□□□□ -0.32
SEC13-211ENST00000431352 CHST10O43529 356 aa13.06□□□□□ -0.32
SEC13-211ENST00000431352 GALR3O60755 368 aaPredicted RBP13.06□□□□□ -0.32
SEC13-211ENST00000431352 MLYCDO95822 493 aa13.06□□□□□ -0.32
SEC13-211ENST00000431352 ABOP16442 354 aa13.06□□□□□ -0.32
SEC13-211ENST00000431352 ALOX12P18054 663 aa13.06□□□□□ -0.32
SEC13-211ENST00000431352 JAK1P23458 1154 aa13.06□□□□□ -0.32
SEC13-211ENST00000431352 IL2P60568 153 aa13.06□□□□□ -0.32
SEC13-211ENST00000431352 RGS1Q08116 209 aa13.06□□□□□ -0.32
SEC13-211ENST00000431352 MAPKAPK3Q16644 382 aa13.06□□□□□ -0.32
SEC13-211ENST00000431352 ZXDCQ2QGD7 858 aaPredicted RBP13.06□□□□□ -0.32
SEC13-211ENST00000431352 BBS9Q3SYG4 887 aa13.06□□□□□ -0.32
SEC13-211ENST00000431352 MSS51Q4VC12 460 aa13.06□□□□□ -0.32
SEC13-211ENST00000431352 CATSPEREQ5SY80 951 aa13.06□□□□□ -0.32
SEC13-211ENST00000431352 ZNF468Q5VIY5 522 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms