RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 IFNL1Q8IU54 200 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 TCEANCQ8N8B7 351 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 UXS1Q8NBZ7 420 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 ZNF461Q8TAF7 563 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 HMGCLL1Q8TB92 370 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 CXorf40AQ8TE69 158 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 PAWRQ96IZ0 340 aaKnown RBP12.2□□□□□ -0.46
CPNE4-201ENST00000429747 SBF2Q86WG5 1849 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 FAM155AB1AL88 458 aaPredicted RBP12.2□□□□□ -0.46
CPNE4-201ENST00000429747 SMAD6O43541 496 aaKnown RBP12.2□□□□□ -0.46
CPNE4-201ENST00000429747 CACNG3O60359 315 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 CSTF2P33240 577 aaKnown RBP eCLIP12.2□□□□□ -0.46
CPNE4-201ENST00000429747 ZNF45Q02386 682 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 ARSIQ5FYB1 569 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 CRB2Q5IJ48 1285 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 BHLHB9Q6PI77 547 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 Q6ZPB1 254 aaPredicted RBP12.2□□□□□ -0.46
CPNE4-201ENST00000429747 GPR149Q86SP6 731 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 PAPD5Q8NDF8 572 aaKnown RBP12.2□□□□□ -0.46
CPNE4-201ENST00000429747 PSD4Q8NDX1 1056 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 NEK6Q9HC98 313 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 IMP3Q9NV31 184 aaKnown RBP12.2□□□□□ -0.46
CPNE4-201ENST00000429747 OR7A17O14581 309 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 SLC35G4P0C7Q5 338 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 CD72P21854 359 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 SDC2P34741 201 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 HEPACAMQ14CZ8 416 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 MAD2L1BPQ15013 274 aaPredicted RBP12.2□□□□□ -0.46
CPNE4-201ENST00000429747 CLEC12AQ5QGZ9 265 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 FAM92BQ6ZTR7 304 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 SIX5Q8N196 739 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 BTN2A2Q8WVV5 523 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 SUSD6Q92537 303 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 DUS3LQ96G46 650 aaKnown RBP12.2□□□□□ -0.46
CPNE4-201ENST00000429747 CLEC4MQ9H2X3 399 aaPredicted RBP12.2□□□□□ -0.46
CPNE4-201ENST00000429747 ANKRA2Q9H9E1 313 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 ZNF232Q9UNY5 417 aa12.2□□□□□ -0.46
CPNE4-201ENST00000429747 KIAA1217Q5T5P2 1943 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 CCRL2O00421 344 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 SEC14L2O76054 403 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 CXCL14O95715 111 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 DNTTP04053 509 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 PSKH1P11801 424 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 CBX2Q14781 532 aaPredicted RBP12.19□□□□□ -0.46
CPNE4-201ENST00000429747 LCN1P1Q5VSP4 162 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 SLC7A5P1Q8MH63 180 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 CYB5D2Q8WUJ1 264 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 MUL1Q969V5 352 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 PHOX2BQ99453 314 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 EFCAB11Q9BUY7 163 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 BEX2Q9BXY8 128 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 UCK2Q9BZX2 261 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 ANKHQ9HCJ1 492 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 ZCCHC3Q9NUD5 404 aaKnown RBP12.19□□□□□ -0.46
CPNE4-201ENST00000429747 HTR3EA5X5Y0 456 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 TLL1O43897 1013 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 TGM3Q08188 693 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 PROX2Q3B8N5 592 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 ZNF697Q5TEC3 545 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 FAM180BQ6P0A1 224 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 C22orf39Q6P5X5 142 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 DPY19L3Q6ZPD9 716 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 LRRC17Q8N6Y2 441 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 ZNF557Q8N988 423 aaPredicted RBP12.19□□□□□ -0.46
CPNE4-201ENST00000429747 FCRL4Q96PJ5 515 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 MAPKAP1Q9BPZ7 522 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 IL1RAPQ9NPH3 570 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 TRPV5Q9NQA5 729 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 UTS2RQ9UKP6 389 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 ATAD5Q96QE3 1844 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 ISPDA4D126 451 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 OR1F1O43749 312 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 GUCY1B2O75343 617 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 H1F0P07305 194 aaKnown RBP12.19□□□□□ -0.46
CPNE4-201ENST00000429747 JUPP14923 745 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 BMP7P18075 431 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 SLC14A2Q15849 920 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 DUS1LQ6P1R4 473 aaKnown RBP12.19□□□□□ -0.46
CPNE4-201ENST00000429747 DLEU7Q6UYE1 221 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 OR51E2Q9H255 320 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 NKIRAS2Q9NYR9 191 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 HCSTQ9UBK5 93 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 CORINQ9Y5Q5 1042 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 HSPE1-MOB4S4R3N1 261 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 PDPK1O15530 556 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 PRG2P13727 222 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 NR4A2P43354 598 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 CCT3P49368 545 aaKnown RBP12.19□□□□□ -0.46
CPNE4-201ENST00000429747 LMAN2Q12907 356 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 FAM217AQ8IXS0 508 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 NAGSQ8N159 534 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 OR52L1Q8NGH7 329 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 AMBRA1Q9C0C7 1298 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 CLMPQ9H6B4 373 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 TMEM45AQ9NWC5 275 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 SPATA7Q9P0W8 599 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 SLCO3A1Q9UIG8 710 aa12.19□□□□□ -0.46
CPNE4-201ENST00000429747 FOCADQ5VW36 1801 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 DOCK5Q9H7D0 1870 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 KNL1Q8NG31 2342 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms