RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 ELP6Q0PNE2 266 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 LAPTM5Q13571 262 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 KRR1Q13601 381 aaKnown RBP8.4□□□□□ -1.06
GABPB1-205ENST00000429662 GTF2H3Q13889 308 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 CLCA4Q14CN2 919 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 MAD2L1BPQ15013 274 aaPredicted RBP8.4□□□□□ -1.06
GABPB1-205ENST00000429662 HIST2H2ACQ16777 129 aaPredicted RBP8.4□□□□□ -1.06
GABPB1-205ENST00000429662 GTDC1Q4AE62 458 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 FBXO43Q4G163 708 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 UBE2UQ5VVX9 321 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 ZCCHC8Q6NZY4 707 aaKnown RBP8.4□□□□□ -1.06
GABPB1-205ENST00000429662 FAHD1Q6P587 224 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 CRTC1Q6UUV9 634 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 HTR3DQ70Z44 454 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 CAMKMTQ7Z624 323 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 CYP4Z1Q86W10 505 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 SYT12Q8IV01 421 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 DEPDC4Q8N2C3 294 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 CLDN19Q8N6F1 224 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 ZNF557Q8N988 423 aaPredicted RBP8.4□□□□□ -1.06
GABPB1-205ENST00000429662 KREMEN2Q8NCW0 462 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 ZNF540Q8NDQ6 660 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 OR6Q1Q8NGQ2 317 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 FIBINQ8TAL6 211 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 SPPL3Q8TCT6 385 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 GLMNQ92990 594 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 ECHDC3Q96DC8 303 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 ALPK1Q96QP1 1244 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 PANX1Q96RD7 426 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 ZNF300Q96RE9 604 aaPredicted RBP8.4□□□□□ -1.06
GABPB1-205ENST00000429662 MCCC1Q96RQ3 725 aaPredicted RBP8.4□□□□□ -1.06
GABPB1-205ENST00000429662 INPP5KQ9BT40 448 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 GABARAPL3Q9BY60 117 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 MMP27Q9H306 513 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 RIBC2Q9H4K1 309 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 KRT84Q9NSB2 600 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 PDP1Q9P0J1 537 aaPredicted RBP8.4□□□□□ -1.06
GABPB1-205ENST00000429662 ERVK-18Q9QC07 812 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 DAPK2Q9UIK4 370 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 PPT2Q9UMR5 302 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 DLGAP4Q9Y2H0 992 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 PCDHB11Q9Y5F2 797 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 CORINQ9Y5Q5 1042 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 VWA8A3KMH1 1905 aa8.4□□□□□ -1.07
GABPB1-205ENST00000429662 HELZ2Q9BYK8 2649 aaKnown RBP8.4□□□□□ -1.07
GABPB1-205ENST00000429662 MYO1GB0I1T2 1018 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 NT5C1B-RDH14C9J2C7 533 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 J3QRK9 145 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 TAF4O00268 1085 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 SCAMP3O14828 347 aaKnown RBP8.39□□□□□ -1.07
GABPB1-205ENST00000429662 ADAMDEC1O15204 470 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 ADAM12O43184 909 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 GREM1O60565 184 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 NADKO95544 446 aaPredicted RBP8.39□□□□□ -1.07
GABPB1-205ENST00000429662 POP4O95707 220 aaKnown RBP8.39□□□□□ -1.07
GABPB1-205ENST00000429662 SOD2P04179 222 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 TFPTP0C1Z6 253 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 CYP2A6P11509 494 aaPredicted RBP8.39□□□□□ -1.07
GABPB1-205ENST00000429662 ANXA8P13928 327 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 COX7A2P14406 83 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 ATP1B2P14415 290 aaPredicted RBP8.39□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF30P17039 623 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 ITGA2P17301 1181 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 POLR2EP19388 210 aaKnown RBP8.39□□□□□ -1.07
GABPB1-205ENST00000429662 PCGF2P35227 344 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 HPCAL1P37235 193 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 HALP42357 657 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 CCR3P51677 355 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 MAPK10P53779 464 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 RPS3AP61247 264 aaKnown RBP8.39□□□□□ -1.07
GABPB1-205ENST00000429662 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.39□□□□□ -1.07
GABPB1-205ENST00000429662 RBBP4Q09028 425 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 NPRL3Q12980 569 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 ATP1A4Q13733 1029 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 RAB33AQ14088 237 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 ANGPT1Q15389 498 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 HKDC1Q2TB90 917 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 PTCHD3Q3KNS1 767 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 CARD16Q5EG05 197 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 TOR1AIP1Q5JTV8 583 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 LDLRAP1Q5SW96 308 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 AGAP7PQ5VUJ5 663 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 GRHL2Q6ISB3 625 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 SYCE2Q6PIF2 218 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 BRICD5Q6PL45 260 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF621Q6ZSS3 439 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 GPR155Q7Z3F1 870 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 CYP2U1Q7Z449 544 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 DNAJB7Q7Z6W7 309 aaPredicted RBP8.39□□□□□ -1.07
GABPB1-205ENST00000429662 PLD3Q8IV08 490 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 RASGRP3Q8IV61 690 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 P3H2Q8IVL5 708 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 SLC30A8Q8IWU4 369 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 GPR65Q8IYL9 337 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 TCEAL8Q8IYN2 117 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 HS3ST5Q8IZT8 346 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 SYNPOQ8N3V7 929 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 ATG16L2Q8NAA4 619 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 GPR26Q8NDV2 337 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 CLHC1Q8NHS4 586 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms