RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SNX5Q9Y5X3 404 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 HSPE1-MOB4S4R3N1 261 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 YY2O15391 372 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 SH3BGRLO75368 114 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 DNAJB5O75953 348 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 IL7RP16871 459 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 PRKACGP22612 351 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 FSHRP23945 695 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 TMBIM6P55061 237 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 CD47Q08722 323 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 FCHO2Q0JRZ9 810 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 MESP2Q0VG99 397 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 GRSF1Q12849 480 aaKnown RBP eCLIP13.16□□□□□ -0.3
THBS3-202ENST00000428962 GAB1Q13480 694 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 PDE7AQ13946 482 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 KEAP1Q14145 624 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 NFE2L1Q14494 772 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 CYP2A13Q16696 494 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 FAM46CQ5VWP2 391 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 TMC5Q6UXY8 1006 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 MMAAQ8IVH4 418 aaKnown RBP13.16□□□□□ -0.3
THBS3-202ENST00000428962 LRRC56Q8IYG6 542 aaPredicted RBP13.16□□□□□ -0.3
THBS3-202ENST00000428962 OR10Q1Q8NGQ4 319 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 ZNF566Q969W8 418 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 ZDHHC5Q9C0B5 715 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 RAD21L1Q9H4I0 556 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 FANCEQ9HB96 536 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 VNN3Q9NY84 501 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 ASF1AQ9Y294 204 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 TBC1D3BA6NDS4 549 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 H3BMQ9 156 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 hCG_2039718K7EN88 272 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 PLK4O00444 970 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 SUV39H1O43463 412 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 SEC14L2O76054 403 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 CCDC159P0C7I6 412 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 EFNA1P20827 205 aaPredicted RBP13.15□□□□□ -0.3
THBS3-202ENST00000428962 HSD17B2P37059 387 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 P2RY2P41231 377 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 ISL1P61371 349 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 RBBP4Q09028 425 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 PPP1R8Q12972 351 aaKnown RBP13.15□□□□□ -0.3
THBS3-202ENST00000428962 GPM6BQ13491 265 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 CAMK2GQ13555 558 aaPredicted RBP13.15□□□□□ -0.3
THBS3-202ENST00000428962 DCTN2Q13561 401 aaKnown RBP13.15□□□□□ -0.3
THBS3-202ENST00000428962 ELOAQ14241 798 aaKnown RBP13.15□□□□□ -0.3
THBS3-202ENST00000428962 MEP1AQ16819 746 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 CHST15Q7LFX5 561 aaPredicted RBP13.15□□□□□ -0.3
THBS3-202ENST00000428962 SPRED2Q7Z698 418 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 METTL4Q8N3J2 472 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 C12orf76Q8N812 135 aaPredicted RBP13.15□□□□□ -0.3
THBS3-202ENST00000428962 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.15□□□□□ -0.3
THBS3-202ENST00000428962 COX14Q96I36 57 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 COG8Q96MW5 612 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 APOL4Q9BPW4 351 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 OR52A5Q9H2C5 316 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 TRIT1Q9H3H1 467 aaKnown RBP13.15□□□□□ -0.3
THBS3-202ENST00000428962 LIN28AQ9H9Z2 209 aaKnown RBP13.15□□□□□ -0.3
THBS3-202ENST00000428962 SH2B3Q9UQQ2 575 aa13.15□□□□□ -0.3
THBS3-202ENST00000428962 SAMHD1Q9Y3Z3 626 aaKnown RBP13.15□□□□□ -0.3
THBS3-202ENST00000428962 TCF20Q9UGU0 1960 aaKnown RBP13.15□□□□□ -0.3
THBS3-202ENST00000428962 SLC1A7O00341 560 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 SOX1O00570 391 aaPredicted RBP13.14□□□□□ -0.31
THBS3-202ENST00000428962 B4GAT1O43505 415 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 JRKO75564 520 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 TGFB1P01137 390 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 FURINP09958 794 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 CDK4P11802 303 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 DDX5P17844 614 aaKnown RBP13.14□□□□□ -0.31
THBS3-202ENST00000428962 PTX3P26022 381 aaPredicted RBP13.14□□□□□ -0.31
THBS3-202ENST00000428962 VLDLRP98155 873 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 FADDQ13158 208 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 ARHGAP19Q14CB8 494 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 CTU2Q2VPK5 515 aaKnown RBP13.14□□□□□ -0.31
THBS3-202ENST00000428962 GCNT6Q5T4J0 391 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 KDM4DQ6B0I6 523 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 TRIM40Q6P9F5 258 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 XKR5Q6UX68 686 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 ANGPTL8Q6UXH0 198 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 ARMCX6Q7L4S7 300 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 VTCN1Q7Z7D3 282 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 LRRTM4Q86VH4 590 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 AMZ2Q86W34 360 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 OXR1Q8N573 874 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 OR52N2Q8NGI0 321 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 C16orf78Q8WTQ4 265 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 FBLIM1Q8WUP2 373 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 TPD52L3Q96J77 140 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 EPYCQ99645 322 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 DOHHQ9BU89 302 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 RIBC2Q9H4K1 309 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 GDE1Q9NZC3 331 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 AHSPQ9NZD4 102 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 ERVK-11Q9UQG0 969 aa13.14□□□□□ -0.31
THBS3-202ENST00000428962 OTOL1A6NHN0 477 aaPredicted RBP13.13□□□□□ -0.31
THBS3-202ENST00000428962 GPR37L1O60883 481 aa13.13□□□□□ -0.31
THBS3-202ENST00000428962 C9P02748 559 aa13.13□□□□□ -0.31
THBS3-202ENST00000428962 NTRK1P04629 796 aa13.13□□□□□ -0.31
THBS3-202ENST00000428962 EPHX1P07099 455 aa13.13□□□□□ -0.31
THBS3-202ENST00000428962 SERPINB1P30740 379 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms