RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 PCDHGB7Q9Y5F8 929 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 SLC38A8A6NNN8 435 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 VNN2O95498 520 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 POP4O95707 220 aaKnown RBP14.05□□□□□ -0.16
PTPRU-204ENST00000428026 GJA5P36382 358 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 SLC13A2Q13183 592 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 NFE2L1Q14494 772 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 EIPR1Q53HC9 387 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 CCDC54Q8NEL0 328 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 C12orf66Q96MD2 445 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF285Q96NJ3 590 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 MMP27Q9H306 513 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 MKKSQ9NPJ1 570 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-204ENST00000428026 TRIM36Q9NQ86 728 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 PLD2O14939 933 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 RPS24P62847 133 aaKnown RBP14.05□□□□□ -0.16
PTPRU-204ENST00000428026 FBXO15Q8NCQ5 510 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-204ENST00000428026 GATAD2BQ8WXI9 593 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 S100PBPQ96BU1 408 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 SLC7A6OSQ96CW6 309 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-204ENST00000428026 ADAD1Q96M93 576 aaKnown RBP14.05□□□□□ -0.16
PTPRU-204ENST00000428026 CENPMQ9NSP4 180 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 PLEKHA6Q9Y2H5 1048 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 A0A1W2PRU2 124 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 CLDN4O14493 209 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 JUNP05412 331 aaKnown RBP14.04□□□□□ -0.16
PTPRU-204ENST00000428026 SEC13P55735 322 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 LSAMPQ13449 338 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 PAMR1Q6UXH9 720 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 CLEC20AQ6ZU45 233 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 MCEMP1Q8IX19 187 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 SCML4Q8N228 414 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 OR14C36Q8NHC7 312 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 NDC1Q9BTX1 674 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF471Q9BX82 626 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-204ENST00000428026 TPT1P8Q9HAU6 139 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 COQ3Q9NZJ6 369 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 P2RX2Q9UBL9 471 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 M0R2N6 131 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 RENP00797 406 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 PABPC4LP0CB38 370 aaKnown RBP14.04□□□□□ -0.16
PTPRU-204ENST00000428026 KELP23276 732 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 OR8S1Q8NH09 359 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 CASTOR1Q8WTX7 329 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 RNF11Q9Y3C5 154 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 COLEC10Q9Y6Z7 277 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 DUOX1Q9NRD9 1551 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 PDE4DIPQ5VU43 2346 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 RFPL1O75677 317 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 ST3GAL4Q11206 333 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 PON2Q15165 354 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 CEACAM20Q6UY09 585 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 CYP4V2Q6ZWL3 525 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-204ENST00000428026 JAGN1Q8N5M9 183 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 YIPF7Q8N8F6 280 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF784Q8NCA9 323 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-204ENST00000428026 MTMR10Q9NXD2 777 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 MANBAO00462 879 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF208O43345 1280 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 MATN1P21941 496 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 CLCN7P51798 805 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF45Q02386 682 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 CTC1Q2NKJ3 1217 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 TCEAL6Q6IPX3 200 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 HFE2Q6ZVN8 426 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 SPATC1Q76KD6 591 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 MARVELD2Q8N4S9 558 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 CD300LFQ8TDQ1 290 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 DHRS1Q96LJ7 313 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 CAMK1GQ96NX5 476 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 SLC32A1Q9H598 525 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 USP29Q9HBJ7 922 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 TM9SF3Q9HD45 589 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 SACM1LQ9NTJ5 587 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 ERVK13-1Q9NX77 482 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 EMC3Q9P0I2 261 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 SIRPGQ9P1W8 387 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 LTBP4Q8N2S1 1624 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 SH3PXD2BA1X283 911 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 MYADML2A6NDP7 307 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 VAMP2P63027 116 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 PTPRCAPQ14761 206 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 CCBE1Q6UXH8 406 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-204ENST00000428026 SLC30A8Q8IWU4 369 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 TXNDC5Q8NBS9 432 aaKnown RBP14.04□□□□□ -0.16
PTPRU-204ENST00000428026 LRCH3Q96II8 777 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 TP63Q9H3D4 680 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-204ENST00000428026 ANKHQ9HCJ1 492 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 EXTL2Q9UBQ6 330 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 GNG8Q9UK08 70 aa14.04□□□□□ -0.16
PTPRU-204ENST00000428026 A0A1B0GVT2 93 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF878C9JN71 531 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF20P17024 532 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 PGGT1BP53609 377 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 LIPKQ5VXJ0 399 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 NANOGP8Q6NSW7 305 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 LRRC69Q6ZNQ3 347 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 CDHR3Q6ZTQ4 885 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 PXYLP1Q8TE99 480 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 BADQ92934 168 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms