RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 PTPN20Q4JDL3 420 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF678Q5SXM1 525 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 DNLZQ5SXM8 178 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 AVPI1Q5T686 147 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 STRIP1Q5VSL9 837 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 IER5Q5VY09 327 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 BSPRYQ5W0U4 402 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC22A10Q63ZE4 541 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 CPZQ66K79 652 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 TXNRD3NBQ6F5E7 133 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC25A25Q6KCM7 469 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 FUT10Q6P4F1 479 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 TBPL2Q6SJ96 375 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 SEZ6L2Q6UXD5 910 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 MSANTD1Q6ZTZ1 278 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 TSPAN33Q86UF1 283 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 NLRP8Q86W28 1048 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZFAND4Q86XD8 727 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 FUNDC1Q8IVP5 155 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 DENND6AQ8IWF6 608 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC34A3Q8N130 599 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEM132CQ8N3T6 1108 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 DTWD1Q8N5C7 304 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF557Q8N988 423 aaPredicted RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 BVESQ8NE79 360 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR2T4Q8NH00 348 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 RHEBL1Q8TAI7 183 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 CYP2W1Q8TAV3 490 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 HMGCLL1Q8TB92 370 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 HEXDCQ8WVB3 486 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 ARNTL2Q8WYA1 636 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 NXPE3Q969Y0 559 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 RAB7BQ96AH8 199 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 COQ8BQ96D53 544 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 CHFRQ96EP1 664 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 PGAP3Q96FM1 320 aaPredicted RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 SCRN2Q96FV2 425 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 TRMT2BQ96GJ1 504 aaKnown RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 CDKN2AIPNLQ96HQ2 116 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 NARS2Q96I59 477 aaKnown RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM167AQ96KS9 214 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 FCRL1Q96LA6 429 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 PRMT6Q96LA8 375 aaPredicted RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 KLHL15Q96M94 604 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 KCTD7Q96MP8 289 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR5M11Q96RB7 305 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 SDHCQ99643 169 aaPredicted RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 MGLLQ99685 303 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 MAPKAP1Q9BPZ7 522 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 KCNS3Q9BQ31 491 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 TREX2Q9BQ50 279 aaPredicted RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEM175Q9BSA9 504 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 PI4K2AQ9BTU6 479 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 MSTO1Q9BUK6 570 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 PTDSS2Q9BVG9 487 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 DPCDQ9BVM2 203 aaPredicted RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 BEX2Q9BXY8 128 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMPRSS13Q9BYE2 586 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 B3GNT5Q9BYG0 378 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 ABCG4Q9H172 646 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 CHRDQ9H2X0 955 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 CPVLQ9H3G5 476 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 MROH8Q9H579 483 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 SMURF2Q9HAU4 748 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 TCF7L1Q9HCS4 588 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 EXOSC4Q9NPD3 245 aaKnown RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 ISYNA1Q9NPH2 558 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 DCAF13Q9NV06 445 aaKnown RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 NDUFB11Q9NX14 153 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 SEC14L3Q9UDX4 400 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 POMT2Q9UKY4 750 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 OGDHLQ9ULD0 1010 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 MINPP1Q9UNW1 487 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 INVSQ9Y283 1065 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 FIS1Q9Y3D6 152 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 MAFBQ9Y5Q3 323 aaPredicted RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 GPR45Q9Y5Y3 372 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 PTCH2Q9Y6C5 1203 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 MEIKINA0A087WXM9 373 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZCWPW2A0A1B0GU75 182 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 RAB19A4D1S5 217 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 TRABD2BA6NFA1 517 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 RHPN2P1A8MT19 583 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 C5orf58C9J3I9 102 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 M0QYV0 167 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 DFFAO00273 331 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 IMPA2O14732 288 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 CHST10O43529 356 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 LCMT2O60294 686 aaKnown RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 NOBOXO60393 691 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 PRMT3O60678 531 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 AQP8O94778 261 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 PAK4O96013 591 aaPredicted RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 C1RP00736 705 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 CYP19A1P11511 503 aaPredicted RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 COL6A1P12109 1028 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 PRG2P13727 222 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 PRF1P14222 555 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 JUPP14923 745 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 HPGDP15428 266 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms