RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 LRRC57Q8N9N7 239 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 TMBIM1Q969X1 311 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 RBP7Q96R05 134 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 MTERF1Q99551 399 aaKnown RBP14.02□□□□□ -0.16
PTPN13-203ENST00000427191 NPLQ9BXD5 320 aaPredicted RBP14.02□□□□□ -0.16
PTPN13-203ENST00000427191 TOR3AQ9H497 397 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 RETREG1Q9H6L5 497 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 CLEC3AO75596 197 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 OAS1P00973 400 aaKnown RBP14.02□□□□□ -0.17
PTPN13-203ENST00000427191 ENGP17813 658 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 REEP3Q6NUK4 255 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 FAM124AQ86V42 546 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 BIRC8Q96P09 236 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 MRI1Q9BV20 369 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 ZBTB26Q9HCK0 441 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 TRBC2A0A5B9 178 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 FBP2O00757 339 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 CDRT1O95170 752 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 OAZ2O95190 189 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 GAS6Q14393 721 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 APOBEC3HQ6NTF7 200 aaKnown RBP14.02□□□□□ -0.17
PTPN13-203ENST00000427191 PDSS2Q86YH6 399 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 NIFKQ9BYG3 293 aaKnown RBP14.02□□□□□ -0.17
PTPN13-203ENST00000427191 TLE6Q9H808 572 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 EDARQ9UNE0 448 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 ZFP37Q9Y6Q3 630 aaPredicted RBP14.02□□□□□ -0.17
PTPN13-203ENST00000427191 TISP43B9A030 160 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 TOR1BO14657 336 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 RFPL1O75677 317 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 SELPP16109 830 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 CAPN3P20807 821 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 CHMP24386 653 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 OXTRP30559 389 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 SLC36A3Q495N2 470 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 NKAPLQ5M9Q1 402 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 GOLM1Q8NBJ4 401 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 OR6K2Q8NGY2 324 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 DPEP2Q9H4A9 486 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 STXBP5LQ9Y2K9 1186 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 PLA2G16P53816 162 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 PLP2Q04941 152 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 ZNF169Q14929 603 aaPredicted RBP14.02□□□□□ -0.17
PTPN13-203ENST00000427191 GSKIPQ9P0R6 139 aa14.02□□□□□ -0.17
PTPN13-203ENST00000427191 TUBG1P23258 451 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 PBX1P40424 430 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 VGLL4Q14135 290 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 OR4K17Q8NGC6 315 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 ASB12Q8WXK4 309 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 CDCA5Q96FF9 252 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 CCDC120Q96HB5 630 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 WDR26Q9H7D7 661 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 PCDHB14Q9Y5E9 798 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 CAPN5O15484 640 aaPredicted RBP14.01□□□□□ -0.17
PTPN13-203ENST00000427191 FAM155BO75949 473 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 DIRAS3O95661 229 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 IFNA17P01571 189 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 SLC3A1Q07837 685 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 MALSU1Q96EH3 234 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 OSBPL7Q9BZF2 842 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 UTS2RQ9UKP6 389 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 LOC100509620A0A075B734 347 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 PMM2O15305 246 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 AHSA1O95433 338 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 IRF5Q13568 498 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 RAB31Q13636 194 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 TMEM41AQ96HV5 264 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 MTG2Q9H4K7 406 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 HSPE1-MOB4S4R3N1 261 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 SLIT3O75094 1523 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 EIF5A2Q9GZV4 153 aaKnown RBP14.01□□□□□ -0.17
PTPN13-203ENST00000427191 NDUFAF4Q9P032 175 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 C2CD4BA6NLJ0 364 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 BCAS2O75934 225 aaPredicted RBP14.01□□□□□ -0.17
PTPN13-203ENST00000427191 HRH2P25021 359 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 TREML1Q86YW5 311 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 TCTEX1D2Q8WW35 142 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 TMEM125Q96AQ2 219 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 OSBPL2Q9H1P3 480 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 EVLQ9UI08 416 aaPredicted RBP14.01□□□□□ -0.17
PTPN13-203ENST00000427191 ADM5C9JUS6 153 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 MUSKO15146 869 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 EPHB6O15197 1021 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 ZNF35P13682 527 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 SP3Q02447 781 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 ZNF598Q86UK7 904 aaKnown RBP14.01□□□□□ -0.17
PTPN13-203ENST00000427191 SLC25A36Q96CQ1 311 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 POPDC3Q9HBV1 291 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 TMLHEQ9NVH6 421 aa14.01□□□□□ -0.17
PTPN13-203ENST00000427191 C17orf113A0A1B0GUU1 675 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 FAM170BA6NMN3 283 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 VEGFDO43915 354 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 MT-ND1P03886 318 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 C4BPAP04003 597 aaKnown RBP14□□□□□ -0.17
PTPN13-203ENST00000427191 FAM163BP0C2L3 166 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 CDK6Q00534 326 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 SLC18A2Q05940 514 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 KANK2Q63ZY3 851 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 KCTD9Q7L273 389 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 S100A7AQ86SG5 101 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 FOXRED2Q8IWF2 684 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms