RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 PTCD3Q96EY7 689 aaKnown RBP17.1■□□□□ 0.33
HERC3-205ENST00000426683 IP6K3Q96PC2 410 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 CRB3Q9BUF7 120 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 ING2Q9H160 280 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 MKKSQ9NPJ1 570 aaPredicted RBP17.1■□□□□ 0.33
HERC3-205ENST00000426683 TBK1Q9UHD2 729 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 TUBD1Q9UJT1 453 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 SLC22A7Q9Y694 548 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 SEC16AO15027 2179 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 MDC1Q14676 2089 aaKnown RBP17.09■□□□□ 0.33
HERC3-205ENST00000426683 SGK494L7N484 410 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 IGHEP01854 428 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 MMP11P24347 488 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 HNF4AP41235 474 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 NAA30Q147X3 362 aaPredicted RBP17.09■□□□□ 0.33
HERC3-205ENST00000426683 HERC3Q15034 1050 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 PAGE2BQ5JRK9 111 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 MED25Q71SY5 747 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 PDSS2Q86YH6 399 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 AFAP1L2Q8N4X5 818 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 TEX9Q8N6V9 391 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 TMEM102Q8N9M5 508 aaPredicted RBP17.09■□□□□ 0.33
HERC3-205ENST00000426683 TTLQ8NG68 377 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 CREB3L4Q8TEY5 395 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 ABHD17AQ96GS6 310 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 EFCAB11Q9BUY7 163 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 SLC6A16Q9GZN6 736 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 PITHD1Q9GZP4 211 aaPredicted RBP17.09■□□□□ 0.33
HERC3-205ENST00000426683 NT5DC2Q9H857 520 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 SEMA3GQ9NS98 782 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 C14orf105Q9NVL8 296 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 P4HTMQ9NXG6 502 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 HCN3Q9P1Z3 774 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 COPG2Q9UBF2 871 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 NAALAD2Q9Y3Q0 740 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 ANGPTL3Q9Y5C1 460 aa17.09■□□□□ 0.33
HERC3-205ENST00000426683 IGSF10Q6WRI0 2623 aa17.08■□□□□ 0.33
HERC3-205ENST00000426683 URADA6NGE7 173 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 LRRC14BA6NHZ5 514 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 MKRN2OSH3BPM6 223 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 RDH16O75452 317 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 C1QL1O75973 258 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 KLHL18O94889 574 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 ZNF888P0CJ79 500 aaPredicted RBP17.08■□□□□ 0.32
HERC3-205ENST00000426683 EPB42P16452 691 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 ALOX12P18054 663 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 CD22P20273 847 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 HSD17B3P37058 310 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 CCL11P51671 97 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 RRADP55042 308 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 HYAL2Q12891 473 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 LAPTM5Q13571 262 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 PCBP2Q15366 365 aaKnown RBP eCLIP17.08■□□□□ 0.32
HERC3-205ENST00000426683 TBCCQ15814 346 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 RBBP7Q16576 425 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 TOR1AIP1Q5JTV8 583 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 WDR93Q6P2C0 686 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 ABHD13Q7L211 337 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 LAPTM4BQ86VI4 370 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 ZC3H7AQ8IWR0 971 aaKnown RBP17.08■□□□□ 0.32
HERC3-205ENST00000426683 PTGR2Q8N8N7 351 aaPredicted RBP17.08■□□□□ 0.32
HERC3-205ENST00000426683 C9orf43Q8TAL5 461 aaPredicted RBP17.08■□□□□ 0.32
HERC3-205ENST00000426683 CCT6BQ92526 530 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 NACC2Q96BF6 587 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 FER1L6-AS2Q96M78 137 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 MRPL57Q9BQC6 102 aaKnown RBP17.08■□□□□ 0.32
HERC3-205ENST00000426683 TGIF2Q9GZN2 237 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 SLC25A18Q9H1K4 315 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 MRPL46Q9H2W6 279 aaKnown RBP17.08■□□□□ 0.32
HERC3-205ENST00000426683 C3orf18Q9UK00 162 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 TMCO1Q9UM00 188 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 TNPO3Q9Y5L0 923 aaKnown RBP17.08■□□□□ 0.32
HERC3-205ENST00000426683 HS3ST3B1Q9Y662 390 aa17.08■□□□□ 0.32
HERC3-205ENST00000426683 ZNF860A6NHJ4 632 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 ANKDD1BA6NHY2 528 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 SMIM23A6NLE4 172 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 GOLGA8RI6L899 631 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 GALR3O60755 368 aaPredicted RBP17.07■□□□□ 0.32
HERC3-205ENST00000426683 SMIM24O75264 130 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 SIX3O95343 332 aaPredicted RBP17.07■□□□□ 0.32
HERC3-205ENST00000426683 B3GALT4O96024 378 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 SERPINA6P08185 405 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 GSTM2P28161 218 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 SLCO1A2P46721 670 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 EMP2P54851 167 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 RAB8AP61006 207 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 HIST2H2ACQ16777 129 aaPredicted RBP17.07■□□□□ 0.32
HERC3-205ENST00000426683 ERCC6LQ2NKX8 1250 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 DEFB134Q4QY38 66 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 HIST2H2AA3Q6FI13 130 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 SHISA5Q8N114 240 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 CNPY4Q8N129 248 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 ZNF843Q8N446 348 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 OR51Q1Q8NH59 317 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 UTP15Q8TED0 518 aaKnown RBP17.07■□□□□ 0.32
HERC3-205ENST00000426683 MZB1Q8WU39 189 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 PHF21BQ96EK2 531 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 SEC16BQ96JE7 1060 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 KLHL31Q9H511 634 aa17.07■□□□□ 0.32
HERC3-205ENST00000426683 ZNF490Q9ULM2 529 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms