RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 REXO1L1PQ8IX06 675 aa13.74□□□□□ -0.21
PDAP1-202ENST00000426447 CCDC89Q8N998 374 aa13.74□□□□□ -0.21
PDAP1-202ENST00000426447 TC2NQ8N9U0 490 aa13.74□□□□□ -0.21
PDAP1-202ENST00000426447 KCT2Q8NC54 265 aa13.74□□□□□ -0.21
PDAP1-202ENST00000426447 OR10Q1Q8NGQ4 319 aa13.74□□□□□ -0.21
PDAP1-202ENST00000426447 SLC13A3Q8WWT9 602 aa13.74□□□□□ -0.21
PDAP1-202ENST00000426447 LPGAT1Q92604 370 aa13.74□□□□□ -0.21
PDAP1-202ENST00000426447 NINJ1Q92982 152 aa13.74□□□□□ -0.21
PDAP1-202ENST00000426447 THAP11Q96EK4 314 aa13.74□□□□□ -0.21
PDAP1-202ENST00000426447 OR1F2PQ96R84 312 aa13.74□□□□□ -0.21
PDAP1-202ENST00000426447 TCF12Q99081 682 aa13.74□□□□□ -0.21
PDAP1-202ENST00000426447 IL22Q9GZX6 179 aa13.74□□□□□ -0.21
PDAP1-202ENST00000426447 CXXC4Q9H2H0 198 aa13.74□□□□□ -0.21
PDAP1-202ENST00000426447 BFARQ9NZS9 450 aa13.74□□□□□ -0.21
PDAP1-202ENST00000426447 EDARQ9UNE0 448 aa13.74□□□□□ -0.21
PDAP1-202ENST00000426447 PACSIN2Q9UNF0 486 aaPredicted RBP13.74□□□□□ -0.21
PDAP1-202ENST00000426447 FEZF1A0PJY2 475 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 GRID2IPA4D2P6 1211 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 ZNF860A6NHJ4 632 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 MIF4GDA9UHW6 222 aaKnown RBP13.73□□□□□ -0.21
PDAP1-202ENST00000426447 JAK1P23458 1154 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 NPY2RP49146 381 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 MPP1Q00013 466 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 CEBPEQ15744 281 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 TTLL9Q3SXZ7 439 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 CMPK2Q5EBM0 449 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 CES3Q6UWW8 571 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 ASPGQ86U10 573 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 SLC26A11Q86WA9 606 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 ZNF227Q86WZ6 799 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 PDSS2Q86YH6 399 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 LRRC57Q8N9N7 239 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 MYRIPQ8NFW9 859 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 OR5M3Q8NGP4 307 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 SEC16BQ96JE7 1060 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 CCDC138Q96M89 665 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 PTCHD1Q96NR3 888 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 POLDIP3Q9BY77 421 aaKnown RBP13.73□□□□□ -0.21
PDAP1-202ENST00000426447 DEFB126Q9BYW3 111 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 DEFB127Q9H1M4 99 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 GSX1Q9H4S2 264 aaPredicted RBP13.73□□□□□ -0.21
PDAP1-202ENST00000426447 TRIM45Q9H8W5 580 aaPredicted RBP13.73□□□□□ -0.21
PDAP1-202ENST00000426447 CCDC177Q9NQR7 707 aaPredicted RBP13.73□□□□□ -0.21
PDAP1-202ENST00000426447 PAK5Q9P286 719 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 DRG1Q9Y295 367 aaKnown RBP13.73□□□□□ -0.21
PDAP1-202ENST00000426447 EPN1Q9Y6I3 576 aaPredicted RBP13.73□□□□□ -0.21
PDAP1-202ENST00000426447 SCN2AQ99250 2005 aa13.73□□□□□ -0.21
PDAP1-202ENST00000426447 AP3B1O00203 1094 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 LIASO43766 372 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 KLK8O60259 260 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 B4GALT2O60909 372 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 FHP07954 510 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 SLC35G6P0C7Q6 338 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 TRHRP34981 398 aaPredicted RBP13.72□□□□□ -0.21
PDAP1-202ENST00000426447 GRK3P35626 688 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 ADARP55265 1226 aaKnown RBP13.72□□□□□ -0.21
PDAP1-202ENST00000426447 NUP107P57740 925 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 GPR85P60893 370 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 SNX1Q13596 522 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 CAPN13Q6MZZ7 669 aaPredicted RBP13.72□□□□□ -0.21
PDAP1-202ENST00000426447 LRRC56Q8IYG6 542 aaPredicted RBP13.72□□□□□ -0.21
PDAP1-202ENST00000426447 SYCE1Q8N0S2 351 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 RPRMLQ8N4K4 120 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 TMEM156Q8N614 296 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 FBXO15Q8NCQ5 510 aaPredicted RBP13.72□□□□□ -0.21
PDAP1-202ENST00000426447 OR5T3Q8NGG3 340 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 OR52N2Q8NGI0 321 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 C16orf52Q8NHV5 167 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 ASB11Q8WXH4 323 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 TBC1D20Q96BZ9 403 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 TM4SF19Q96DZ7 209 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 MFSD3Q96ES6 412 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 FAM129AQ9BZQ8 928 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 SLC6A16Q9GZN6 736 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 LANCL2Q9NS86 450 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 SLC22A7Q9Y694 548 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 GTF3C1Q12789 2109 aa13.72□□□□□ -0.21
PDAP1-202ENST00000426447 FAM237BA0A1B0GVD1 139 aa13.71□□□□□ -0.21
PDAP1-202ENST00000426447 TMEM200CA6NKL6 621 aa13.71□□□□□ -0.21
PDAP1-202ENST00000426447 BTNL10A8MVZ5 291 aa13.71□□□□□ -0.21
PDAP1-202ENST00000426447 NPIPA2E9PIF3 369 aa13.71□□□□□ -0.21
PDAP1-202ENST00000426447 NPIPA3F8WFD2 350 aa13.71□□□□□ -0.21
PDAP1-202ENST00000426447 LCMT2O60294 686 aaKnown RBP13.71□□□□□ -0.21
PDAP1-202ENST00000426447 DNASE1P24855 282 aa13.71□□□□□ -0.21
PDAP1-202ENST00000426447 IMPA1P29218 277 aa13.71□□□□□ -0.21
PDAP1-202ENST00000426447 COILP38432 576 aaPredicted RBP13.71□□□□□ -0.21
PDAP1-202ENST00000426447 MEF2AQ02078 507 aaPredicted RBP13.71□□□□□ -0.21
PDAP1-202ENST00000426447 FOXD4Q12950 439 aaPredicted RBP13.71□□□□□ -0.21
PDAP1-202ENST00000426447 CUL1Q13616 776 aa13.71□□□□□ -0.21
PDAP1-202ENST00000426447 HERC3Q15034 1050 aa13.71□□□□□ -0.21
PDAP1-202ENST00000426447 OASLQ15646 514 aaKnown RBP13.71□□□□□ -0.21
PDAP1-202ENST00000426447 TYSND1Q2T9J0 566 aa13.71□□□□□ -0.21
PDAP1-202ENST00000426447 GXYLT1Q4G148 440 aa13.71□□□□□ -0.21
PDAP1-202ENST00000426447 CYP4Z2PQ8N1L4 340 aa13.71□□□□□ -0.21
PDAP1-202ENST00000426447 PRELID2Q8N945 189 aa13.71□□□□□ -0.21
PDAP1-202ENST00000426447 C1orf54Q8WWF1 131 aa13.71□□□□□ -0.21
PDAP1-202ENST00000426447 ALKBH8Q96BT7 664 aaKnown RBP13.71□□□□□ -0.21
PDAP1-202ENST00000426447 FRMD8P1Q9BZ68 369 aaPredicted RBP13.71□□□□□ -0.21
PDAP1-202ENST00000426447 LACRTQ9GZZ8 138 aa13.71□□□□□ -0.21
PDAP1-202ENST00000426447 PCBD2Q9H0N5 130 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms