RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 KIAA0040Q15053 153 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 MAPRE2Q15555 327 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 ZIC1Q15915 447 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 IL23RQ5VWK5 629 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 KHDRBS2Q5VWX1 349 aaKnown RBP9.88□□□□□ -0.83
MDC1-205ENST00000425072 FAM91A1Q658Y4 838 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 NOXRED1Q6NXP6 359 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 FAM92BQ6ZTR7 304 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 USP53Q70EK8 1073 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 SPRED1Q7Z699 444 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 CLNKQ7Z7G1 428 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 ASPGQ86U10 573 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 MCATQ8IVS2 390 aaKnown RBP9.88□□□□□ -0.83
MDC1-205ENST00000425072 FAM20CQ8IXL6 584 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 METTL4Q8N3J2 472 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 ANKRD53Q8N9V6 530 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 OR2I1PQ8NGU4 316 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 OR2T11Q8NH01 316 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 TSPEARQ8WU66 669 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 N4BP2L2Q92802 583 aaPredicted RBP9.88□□□□□ -0.83
MDC1-205ENST00000425072 TM4SF19Q96DZ7 209 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 NSL1Q96IY1 281 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 CNDP2Q96KP4 475 aaKnown RBP9.88□□□□□ -0.83
MDC1-205ENST00000425072 TGM7Q96PF1 710 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 OR2A5Q96R48 311 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 MAP3K3Q99759 626 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 CCDC3Q9BQI4 270 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 CCDC106Q9BWC9 280 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 ACPTQ9BZG2 426 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 ROGDIQ9GZN7 287 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 NMUR2Q9GZQ4 415 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 ZMYND15Q9H091 742 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 OR51B5Q9H339 312 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 LRRN3Q9H3W5 708 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 SEMA5BQ9P283 1151 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 ADAM29Q9UKF5 820 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 PILRAQ9UKJ1 303 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 G3BP2Q9UN86 482 aaKnown RBP9.88□□□□□ -0.83
MDC1-205ENST00000425072 ASXL3Q9C0F0 2248 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 RP1P56715 2156 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 A0A088AWK7 358 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 A0A0J9YVX5 310 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 ARHGAP10A1A4S6 786 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 DYTNA2CJ06 578 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 CDX4O14627 284 aaPredicted RBP9.87□□□□□ -0.83
MDC1-205ENST00000425072 HAT1O14929 419 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 PRMT3O60678 531 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 HNRNPCL1O60812 293 aaKnown RBP9.87□□□□□ -0.83
MDC1-205ENST00000425072 GUCY1B2O75343 617 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 SLC22A3O75751 556 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 CDK4P11802 303 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 DDX5P17844 614 aaKnown RBP9.87□□□□□ -0.83
MDC1-205ENST00000425072 ZNF10P21506 573 aaPredicted RBP9.87□□□□□ -0.83
MDC1-205ENST00000425072 ACP1P24666 158 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 PRDX6P30041 224 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 BCL6P41182 706 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 GSTM5P46439 218 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 ASMTP46597 345 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 RAP1GDS1P52306 607 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 CCL7P80098 99 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 KLF10Q13118 480 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 STX5Q13190 355 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 ILKQ13418 452 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 DSG2Q14126 1118 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 SF3A2Q15428 464 aaKnown RBP9.87□□□□□ -0.83
MDC1-205ENST00000425072 TCTE1Q5JU00 501 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 NKAIN2Q5VXU1 208 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 TCEAL6Q6IPX3 200 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 NIPAL1Q6NVV3 410 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 GUSBP11Q6P575 273 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 GALNT18Q6P9A2 607 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 ZNF771Q7L3S4 317 aaPredicted RBP9.87□□□□□ -0.83
MDC1-205ENST00000425072 YTHDF3Q7Z739 585 aaKnown RBP9.87□□□□□ -0.83
MDC1-205ENST00000425072 TRIM73Q86UV7 250 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.87□□□□□ -0.83
MDC1-205ENST00000425072 DNAJC22Q8N4W6 341 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 GLB1L3Q8NCI6 653 aaPredicted RBP9.87□□□□□ -0.83
MDC1-205ENST00000425072 OR4D9Q8NGE8 314 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 RP9Q8TA86 221 aaKnown RBP9.87□□□□□ -0.83
MDC1-205ENST00000425072 IFI44Q8TCB0 444 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 NT5CQ8TCD5 201 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 CREB3L4Q8TEY5 395 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 STARD8Q92502 1023 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 TCEAL3Q969E4 200 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 ERP27Q96DN0 273 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 CATSPER2Q96P56 530 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 HBEGFQ99075 208 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 ZBTB18Q99592 522 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 PRPF18Q99633 342 aaKnown RBP9.87□□□□□ -0.83
MDC1-205ENST00000425072 TBCDQ9BTW9 1192 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 MS4A8Q9BY19 250 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 REXO4Q9GZR2 422 aaKnown RBP9.87□□□□□ -0.83
MDC1-205ENST00000425072 SPNS1Q9H2V7 528 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 SDR39U1Q9NRG7 319 aaPredicted RBP9.87□□□□□ -0.83
MDC1-205ENST00000425072 AIG1Q9NVV5 245 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 ZIM2Q9NZV7 527 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 PDP2Q9P2J9 529 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 FTSJ1Q9UET6 329 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 PLCL2Q9UPR0 1127 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 KLHL20Q9Y2M5 609 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms