RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 LIPJQ5W064 366 aa17.54■□□□□ 0.4
HDAC6-205ENST00000423941 LRIG3Q6UXM1 1119 aa17.54■□□□□ 0.4
HDAC6-205ENST00000423941 GPR155Q7Z3F1 870 aa17.54■□□□□ 0.4
HDAC6-205ENST00000423941 SYVN1Q86TM6 617 aa17.54■□□□□ 0.4
HDAC6-205ENST00000423941 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.54■□□□□ 0.4
HDAC6-205ENST00000423941 ENDOVQ8N8Q3 282 aaKnown RBP17.54■□□□□ 0.4
HDAC6-205ENST00000423941 AMER3Q8N944 861 aa17.54■□□□□ 0.4
HDAC6-205ENST00000423941 ADAMTS17Q8TE56 1095 aa17.54■□□□□ 0.4
HDAC6-205ENST00000423941 ZNF483Q8TF39 744 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-205ENST00000423941 ZIM3Q96PE6 472 aa17.54■□□□□ 0.4
HDAC6-205ENST00000423941 IPPKQ9H8X2 491 aa17.54■□□□□ 0.4
HDAC6-205ENST00000423941 WDR54Q9H977 334 aa17.54■□□□□ 0.4
HDAC6-205ENST00000423941 IFT80Q9P2H3 777 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-205ENST00000423941 CACNA1BQ00975 2339 aa17.54■□□□□ 0.4
HDAC6-205ENST00000423941 C9J4A7 227 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 H0YIG0 161 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 OR7A17O14581 309 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 NKX2-8O15522 239 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 ERLIN1O75477 346 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 CLEC3AO75596 197 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 STATHP02808 62 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 TAC1P20366 129 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 IMPDH1P20839 514 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 HNF4AP41235 474 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 HERVK_113P63132 956 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 MC1RQ01726 317 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 DSG2Q14126 1118 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 RBBP5Q15291 538 aaKnown RBP17.53■□□□□ 0.4
HDAC6-205ENST00000423941 CCDC153Q494R4 210 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 PAGE2BQ5JRK9 111 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 GRHL2Q6ISB3 625 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 ZSCAN1Q8NBB4 408 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 L3HYPDHQ96EM0 354 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 NSUN5Q96P11 429 aaKnown RBP17.53■□□□□ 0.4
HDAC6-205ENST00000423941 ERVK-6Q9BXR3 956 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 NDOR1Q9UHB4 597 aa17.53■□□□□ 0.4
HDAC6-205ENST00000423941 A0A0A6YYC8 382 aaPredicted RBP17.52■□□□□ 0.4
HDAC6-205ENST00000423941 LRIT2A6NDA9 550 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 I3L1I5 382 aaPredicted RBP17.52■□□□□ 0.4
HDAC6-205ENST00000423941 COPEO14579 308 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 NDUFS4O43181 175 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 FURINP09958 794 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 RPS18P62269 152 aaKnown RBP17.52■□□□□ 0.4
HDAC6-205ENST00000423941 NKG7Q16617 165 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 UGT8Q16880 541 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 UNC50Q53HI1 259 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 ZNF678Q5SXM1 525 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 MLIPQ5VWP3 458 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 ZYG11AQ6WRX3 759 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 PRSS41Q7RTY9 318 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 PDSS2Q86YH6 399 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 SLC22A9Q8IVM8 553 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 C4orf33Q8N1A6 199 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 OR7G3Q8NG95 312 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 OR2Y1Q8NGV0 311 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 RDH11Q8TC12 318 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 UTP15Q8TED0 518 aaKnown RBP17.52■□□□□ 0.4
HDAC6-205ENST00000423941 SPSB2Q99619 263 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 TGIF2Q9GZN2 237 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 PLLPQ9Y342 182 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 MAP4K5Q9Y4K4 846 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 ANGPTL3Q9Y5C1 460 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 MAU2Q9Y6X3 613 aa17.52■□□□□ 0.4
HDAC6-205ENST00000423941 ATMQ13315 3056 aa17.52■□□□□ 0.39
HDAC6-205ENST00000423941 ANKDD1BA6NHY2 528 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 H0YIV9 168 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 PRPF4O43172 522 aaKnown RBP eCLIP17.51■□□□□ 0.392e-9■■■■■ 30
HDAC6-205ENST00000423941 GALR3O60755 368 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-205ENST00000423941 RGS1Q08116 209 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 CDC20Q12834 499 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 TRAF3Q13114 568 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 HERC3Q15034 1050 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 HIST2H2ACQ16777 129 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-205ENST00000423941 KRT71Q3SY84 523 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 HIST2H2AA3Q6FI13 130 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 ADNP2Q6IQ32 1131 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 MED27Q6P2C8 311 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 CROCCP2Q86T23 111 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 TMEM151BQ8IW70 566 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 OR9A4Q8NGU2 314 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 ZNF473Q8WTR7 871 aaKnown RBP17.51■□□□□ 0.39
HDAC6-205ENST00000423941 PCSK5Q92824 1860 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 UBE2E3Q969T4 207 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 NACC2Q96BF6 587 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 CCDC126Q96EE4 140 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 PGM2Q96G03 612 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 APOPT1Q96IL0 206 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 TMEM237Q96Q45 408 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 C12orf65Q9H3J6 166 aaKnown RBP17.51■□□□□ 0.39
HDAC6-205ENST00000423941 KLHL31Q9H511 634 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 NOL11Q9H8H0 719 aaKnown RBP17.51■□□□□ 0.39
HDAC6-205ENST00000423941 CLK4Q9HAZ1 481 aaKnown RBP17.51■□□□□ 0.39
HDAC6-205ENST00000423941 PSD3Q9NYI0 1048 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 SENP1Q9P0U3 644 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 PADI2Q9Y2J8 665 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 PCDHGA11Q9Y5H2 935 aa17.51■□□□□ 0.39
HDAC6-205ENST00000423941 C4orf51C9J302 202 aa17.5■□□□□ 0.39
HDAC6-205ENST00000423941 TYROBPO43914 113 aa17.5■□□□□ 0.39
HDAC6-205ENST00000423941 CLDN9O95484 217 aa17.5■□□□□ 0.39
HDAC6-205ENST00000423941 UMODP07911 640 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms