RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 AKAP6Q13023 2319 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 PHF3Q92576 2039 aaKnown RBP15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 FEZF1A0PJY2 475 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 E7EVH7 732 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 PEX1O43933 1283 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 ESR1P03372 595 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 PTMAP06454 111 aaKnown RBP15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 CHRM3P20309 590 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 NUP107P57740 925 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 KCNJ11Q14654 390 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 SPA17Q15506 151 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 TYSND1Q2T9J0 566 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 LRRC57Q8N9N7 239 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 KCT2Q8NC54 265 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 MYRIPQ8NFW9 859 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 PEX11GQ96HA9 241 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 CCDC138Q96M89 665 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 TCF12Q99081 682 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 FAM129AQ9BZQ8 928 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 LIME1Q9H400 295 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 L3MBTL1Q9Y468 752 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 DUSP10Q9Y6W6 482 aa15.67■□□□□ 0.1
CHCHD3-202ENST00000423635 FAM237BA0A1B0GVD1 139 aa15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 CDC40O60508 579 aaKnown RBP eCLIP15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 RDH16O75452 317 aa15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 CDC123O75794 336 aaPredicted RBP15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 MEF2AQ02078 507 aaPredicted RBP15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 CEBPEQ15744 281 aa15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 RNF187Q5TA31 235 aaPredicted RBP15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 MEI1Q5TIA1 1274 aa15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 SDCCAG8Q86SQ7 713 aaPredicted RBP15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 REXO1L1PQ8IX06 675 aa15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 OR52N2Q8NGI0 321 aa15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 ASB11Q8WXH4 323 aa15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 FAM136AQ96C01 138 aa15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 ALPK1Q96QP1 1244 aa15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 POLDIP3Q9BY77 421 aaKnown RBP15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 ABCF3Q9NUQ8 709 aa15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 NAALAD2Q9Y3Q0 740 aa15.66■□□□□ 0.1
CHCHD3-202ENST00000423635 TCRBV7S2A1N4TA0A589 114 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 BTNL10A8MVZ5 291 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 GFYI3L273 518 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 FCHO1O14526 889 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 PROM1O43490 865 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 ARNTP27540 789 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 NMBRP28336 390 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 RFC3P40938 356 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 SKIV2L2P42285 1042 aaKnown RBP15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 DLX5P56178 289 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 ADAM8P78325 824 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 RPS6KA1Q15418 735 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 OASLQ15646 514 aaKnown RBP15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 GXYLT1Q4G148 440 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 THEMIS2Q5TEJ8 643 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 MRNIPQ6NTE8 343 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 AFAP1L2Q8N4X5 818 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 TC2NQ8N9U0 490 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 NFAM1Q8NET5 270 aaPredicted RBP15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 TBC1D20Q96BZ9 403 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 RAB6BQ9NRW1 208 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 EDARQ9UNE0 448 aa15.65■□□□□ 0.1
CHCHD3-202ENST00000423635 PFDN6O15212 129 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 LCMT2O60294 686 aaKnown RBP15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 PDE9AO76083 593 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 APRTP07741 180 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 FHP07954 510 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 DNASE1P24855 282 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 IMPA1P29218 277 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 CLCN7P51798 805 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 NAP1L1P55209 391 aaKnown RBP15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 PAOXQ6QHF9 649 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 CYHR1Q6ZMK1 362 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 KIAA0408Q6ZU52 694 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 ASPGQ86U10 573 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 SLC26A11Q86WA9 606 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 OR5T3Q8NGG3 340 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 ZCCHC10Q8TBK6 192 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 SLC13A3Q8WWT9 602 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 MBD6Q96DN6 1003 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 RBCK1Q9BYM8 510 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 IL22Q9GZX6 179 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 KLHL42Q9P2K6 505 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 CRYL1Q9Y2S2 319 aa15.64■□□□□ 0.09
CHCHD3-202ENST00000423635 FLNAP21333 2647 aaKnown RBP15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 GRID2IPA4D2P6 1211 aa15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 SAGE2PA6NJ88 616 aa15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 ZBTB14O43829 449 aa15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 VAPBO95292 243 aa15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 SYF2O95926 243 aaKnown RBP15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 IFNB1P01574 187 aa15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 MPC1LP0DKB6 136 aa15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 CYLC1P35663 651 aaPredicted RBP15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 ZFP36L2P47974 494 aaKnown RBP15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 NPY2RP49146 381 aa15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 NR0B1P51843 470 aaKnown RBP15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 SESN2P58004 480 aaPredicted RBP15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 CRADDP78560 199 aa15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 LTBQ06643 244 aa15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 HERC3Q15034 1050 aa15.63■□□□□ 0.09
CHCHD3-202ENST00000423635 CAPN13Q6MZZ7 669 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms