RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 PTGFRNQ9P2B2 879 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 POLEQ07864 2286 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 DOPEY1Q5JWR5 2465 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 IGHV3-20A0A0C4DH32 117 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 FAM95CA0A1B0GW59 222 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 PABPN1LA6NDY0 278 aaKnown RBP14.36□□□□□ -0.11
USB1-202ENST00000423271 NPEPPSL1A6NEC2 478 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 OR2W5A6NFC9 320 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 CDC7O00311 574 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 RDH16O75452 317 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 CBX6O95503 412 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 SERPINA7P05543 415 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 ENO2P09104 434 aaPredicted RBP14.36□□□□□ -0.11
USB1-202ENST00000423271 GP1BBP13224 206 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 STX2P32856 288 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 TSFMP43897 325 aaKnown RBP14.36□□□□□ -0.11
USB1-202ENST00000423271 EFTUD2Q15029 972 aaKnown RBP eCLIP14.36□□□□□ -0.11
USB1-202ENST00000423271 PPP1R3AQ16821 1122 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 KBTBD12Q3ZCT8 623 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 MINDY4Q4G0A6 757 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 CATSPEREQ5SY80 951 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 LANCL3Q6ZV70 420 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 MFSD9Q8NBP5 474 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 ZNF740Q8NDX6 193 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 CATSPER1Q8NEC5 780 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 ABHD11Q8NFV4 315 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 OR51Q1Q8NH59 317 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 PRR7Q8TB68 274 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 SLC13A3Q8WWT9 602 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 MOCOSQ96EN8 888 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 HAUS8Q9BT25 410 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 ZNF700Q9H0M5 742 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 RIC8BQ9NVN3 520 aa14.36□□□□□ -0.11
USB1-202ENST00000423271 CPAMD8Q8IZJ3 1885 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 ZNF860A6NHJ4 632 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 NDUFS4O43181 175 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 FAM153BP0C7A2 387 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 C8orf89P0DMQ9 161 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 ITGAMP11215 1152 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 GRK3P35626 688 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 XCR1P46094 333 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 CCR8P51685 355 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 TAS2R39P59534 338 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 CDC16Q13042 620 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 FAM153CQ494X1 144 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 MFSD4BQ5TF39 518 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 B3GNTL1Q67FW5 361 aaPredicted RBP14.35□□□□□ -0.11
USB1-202ENST00000423271 HIST2H2BCQ6DN03 193 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 CTAGE3PQ8IX95 158 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 PPM1NQ8N819 430 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 OR4K1Q8NGD4 311 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 SSC4DQ8WTU2 575 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 NEIL2Q969S2 332 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 PDLIM5Q96HC4 596 aaKnown RBP14.35□□□□□ -0.11
USB1-202ENST00000423271 TSNARE1Q96NA8 513 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 LMF1Q96S06 567 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 MCMBPQ9BTE3 642 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 RBCK1Q9BYM8 510 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 TRIM54Q9BYV2 358 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 RHOJQ9H4E5 214 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 ANKZF1Q9H8Y5 726 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 ANKHQ9HCJ1 492 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 PLA2G3Q9NZ20 509 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 NAALAD2Q9Y3Q0 740 aa14.35□□□□□ -0.11
USB1-202ENST00000423271 SCN2AQ99250 2005 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 ANKUB1A6NFN9 424 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 E2F3O00716 465 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 PCDH17O14917 1159 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 OR1F1O43749 312 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 SEC24DO94855 1032 aaPredicted RBP14.34□□□□□ -0.11
USB1-202ENST00000423271 ACSL3O95573 720 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 B3GALT4O96024 378 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 F10P00742 488 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 SLC35G6P0C7Q6 338 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 MYBL2P10244 700 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 TLR1Q15399 786 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 CEP97Q8IW35 865 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 OR5T3Q8NGG3 340 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 GRHL3Q8TE85 626 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 ANKRD49Q8WVL7 239 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 SLC5A11Q8WWX8 675 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 ATL1Q8WXF7 558 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 VPS39Q96JC1 886 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 IMMP1LQ96LU5 166 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 CPNE1Q99829 537 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 SARGQ9BW04 601 aa14.34□□□□□ -0.11
USB1-202ENST00000423271 ERRFI1Q9UJM3 462 aaPredicted RBP14.34□□□□□ -0.11
USB1-202ENST00000423271 ZGRF1Q86YA3 2104 aa14.33□□□□□ -0.11
USB1-202ENST00000423271 TRBC2A0A5B9 178 aa14.33□□□□□ -0.12
USB1-202ENST00000423271 DNAJB6O75190 326 aa14.33□□□□□ -0.12
USB1-202ENST00000423271 FAM155BO75949 473 aa14.33□□□□□ -0.12
USB1-202ENST00000423271 WFS1O76024 890 aa14.33□□□□□ -0.12
USB1-202ENST00000423271 SERPIND1P05546 499 aa14.33□□□□□ -0.12
USB1-202ENST00000423271 UQCRHP07919 91 aa14.33□□□□□ -0.12
USB1-202ENST00000423271 PHBP35232 272 aa14.33□□□□□ -0.12
USB1-202ENST00000423271 GP5P40197 560 aa14.33□□□□□ -0.12
USB1-202ENST00000423271 SCTRP47872 440 aa14.33□□□□□ -0.12
USB1-202ENST00000423271 OLR1P78380 273 aa14.33□□□□□ -0.12
USB1-202ENST00000423271 ARG2P78540 354 aa14.33□□□□□ -0.12
USB1-202ENST00000423271 REEP5Q00765 189 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms