RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 PAK4O96013 591 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-213ENST00000421756 NPPAP01160 153 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 PPM1AP35813 382 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 OPRL1P41146 370 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 SLC6A12P48065 614 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 CLK1P49759 484 aaKnown RBP12.84□□□□□ -0.35
MCF2L-213ENST00000421756 SEPHS1P49903 392 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 WNT3P56703 355 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 RPS3AP61247 264 aaKnown RBP12.84□□□□□ -0.35
MCF2L-213ENST00000421756 ZNF805Q5CZA5 627 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 ZZZ3Q8IYH5 903 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 DDHD1Q8NEL9 900 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 CSGALNACT1Q8TDX6 532 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 CCM2Q9BSQ5 444 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 C6orf62Q9GZU0 229 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-213ENST00000421756 KLHL25Q9H0H3 589 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 RDH14Q9HBH5 336 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 RAD18Q9NS91 495 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 IMP3Q9NV31 184 aaKnown RBP12.84□□□□□ -0.35
MCF2L-213ENST00000421756 BLOC1S6Q9UL45 172 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 PLXNA4Q9HCM2 1894 aa12.83□□□□□ -0.35
MCF2L-213ENST00000421756 KCNE1BA0A087WTH5 132 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 ERAL1O75616 437 aaKnown RBP12.83□□□□□ -0.36
MCF2L-213ENST00000421756 IL3P08700 152 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 IGFBP1P08833 259 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-213ENST00000421756 C8orf89P0DMQ9 161 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 PTPN6P29350 595 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 CAMK2GQ13555 558 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-213ENST00000421756 KRT33BQ14525 404 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 ATG9BQ674R7 924 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 MED27Q6P2C8 311 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 BRAT1Q6PJG6 821 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 FAM83HQ6ZRV2 1179 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-213ENST00000421756 USP51Q70EK9 711 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 ANKRD33Q7Z3H0 272 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 TAGAPQ8N103 731 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 ZNF784Q8NCA9 323 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-213ENST00000421756 PPCDCQ96CD2 204 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 PLEKHA8Q96JA3 519 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 ZNF641Q96N77 438 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-213ENST00000421756 MCCC1Q96RQ3 725 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-213ENST00000421756 PLGRKTQ9HBL7 147 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 CAPN10Q9HC96 672 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 FZD3Q9NPG1 666 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.83□□□□□ -0.36
MCF2L-213ENST00000421756 CUEDC1Q9NWM3 386 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-213ENST00000421756 TRPC4Q9UBN4 977 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 FRMPD3Q5JV73 1810 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 TNFRSF11BO00300 401 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 MOSPD3O75425 235 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 TMEM31Q5JXX7 168 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 WDR53Q7Z5U6 358 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-213ENST00000421756 BCDIN3DQ7Z5W3 292 aaKnown RBP12.83□□□□□ -0.36
MCF2L-213ENST00000421756 NPAS3Q8IXF0 933 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 SLC5A8Q8N695 610 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 SMG7Q92540 1137 aaKnown RBP12.83□□□□□ -0.36
MCF2L-213ENST00000421756 RSPRY1Q96DX4 576 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 LGR4Q9BXB1 951 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 SLC6A17Q9H1V8 727 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 EXOSC4Q9NPD3 245 aaKnown RBP12.83□□□□□ -0.36
MCF2L-213ENST00000421756 SCN3BQ9NY72 215 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 KCNK6Q9Y257 313 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 RUVBL1Q9Y265 456 aaKnown RBP12.83□□□□□ -0.36
MCF2L-213ENST00000421756 VPS13AQ96RL7 3174 aa12.83□□□□□ -0.36
MCF2L-213ENST00000421756 GFYI3L273 518 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 OCM2P0CE71 109 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 OCMP0CE72 109 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-213ENST00000421756 C6P13671 934 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 ZNF8P17098 575 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-213ENST00000421756 HNMTP50135 292 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 SH3BGRP55822 239 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-213ENST00000421756 CYP2A13Q16696 494 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 SLC5A12Q1EHB4 618 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 EGFLAMQ63HQ2 1017 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 FAM109BQ6ICB4 259 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-213ENST00000421756 CAPN13Q6MZZ7 669 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-213ENST00000421756 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-213ENST00000421756 PAGE2Q7Z2X7 111 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 HIPK1Q86Z02 1210 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 CPXM2Q8N436 756 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 OR13F1Q8NGS4 319 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 PRR14Q9BWN1 585 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 GULP1Q9UBP9 304 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 CACNA1CQ13936 2221 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 ADH5P11766 374 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 GP2P55259 537 aaKnown RBP12.82□□□□□ -0.36
MCF2L-213ENST00000421756 BORAQ6PGQ7 559 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 DEF8Q6ZN54 512 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 DGLUCYQ7Z3D6 616 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 CELF5Q8N6W0 485 aaKnown RBP12.82□□□□□ -0.36
MCF2L-213ENST00000421756 C11orf16Q9NQ32 467 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 EQTNQ9NQ60 294 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 SLC23A2Q9UGH3 650 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 ZNF510Q9Y2H8 683 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 URB1O60287 2271 aaKnown RBP12.82□□□□□ -0.36
MCF2L-213ENST00000421756 PCM1Q15154 2024 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 H0YAE9 185 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 GFRA2O00451 464 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 CBSLP0DN79 551 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 ACP5P13686 325 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms