RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 SLC34A1Q06495 639 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 PTPRCAPQ14761 206 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 RASGEF1CQ8N431 466 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 IL17FQ96PD4 163 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 HBEGFQ99075 208 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 HS3ST3A1Q9Y663 406 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 SLC9B1P1A6NJY1 282 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 MT-ND5P03915 603 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 IRF2P14316 349 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 CTGFP29279 349 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 UBE2NP61088 152 aaKnown RBP16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 ZNF844Q08AG5 666 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 ZNF662Q6ZS27 426 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 CPSF7Q8N684 471 aaKnown RBP16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 SCRN2Q96FV2 425 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 CFHR5Q9BXR6 569 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 OR51B5Q9H339 312 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 LRRC4CQ9HCJ2 640 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 TMEM184CQ9NVA4 438 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 AFF1P51825 1210 aaKnown RBP16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 TAS2R39P59534 338 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 POU6F2P78424 691 aaPredicted RBP16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 BNIP2Q12982 314 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 DGLUCYQ7Z3D6 616 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 CHERPQ8IWX8 916 aaKnown RBP16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 ZDHHC14Q8IZN3 488 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 DEFB124Q8NES8 71 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 KCND1Q9NSA2 647 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 ZBTB42B2RXF5 422 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 CAPN5O15484 640 aaPredicted RBP16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 RFPL3O75679 317 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 HOXD9P28356 352 aaPredicted RBP16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 OGDHQ02218 1023 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 UNQ6126/PRO20091Q6UXV3 157 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 TSPAN14Q8NG11 270 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 SEC61A2Q9H9S3 476 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 FEZF1A0PJY2 475 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 CACNG3O60359 315 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 BCAS2O75934 225 aaPredicted RBP16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 TIMP2P16035 220 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 CTBSQ01459 385 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 C1orf53Q5VUE5 145 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 GOLGA7Q7Z5G4 137 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 CKAP2Q8WWK9 683 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 SEC14L1Q92503 715 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 NUAK2Q9H093 628 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 GLS2Q9UI32 602 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 IKZF3Q9UKT9 509 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 TCRBV7S2A1N4TA0A589 114 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 HSD11B1P28845 292 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 OMPP47874 163 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 PDCD4Q53EL6 469 aaKnown RBP16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 ANKRD46Q86W74 232 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 TMEM173Q86WV6 379 aaPredicted RBP16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 CAMK1GQ96NX5 476 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 MOCS1Q9NZB8 636 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 PTGFRNQ9P2B2 879 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 BTBD3Q9Y2F9 522 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 POFUT2Q9Y2G5 429 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 USP54Q70EL1 1684 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 HADHBP55084 474 aaKnown RBP16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 C6orf15Q6UXA7 325 aaPredicted RBP16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 DENND6BQ8NEG7 585 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 OR2T12Q8NG77 320 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 SNX33Q8WV41 574 aa16.35■□□□□ 0.21
SYNGAP1-202ENST00000418600 PAPSS2O95340 614 aaPredicted RBP16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 ACPPP15309 386 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 DPY19L1Q2PZI1 675 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 DRICH1Q6PGQ1 229 aaPredicted RBP16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 GPAT4Q86UL3 456 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 MINDY1Q8N5J2 469 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 ABCA3Q99758 1704 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 MAFKO60675 156 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 CDK4P11802 303 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 COX4I1P13073 169 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 MAZP56270 477 aaKnown RBP16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 RAB2AP61019 212 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 DCST1Q5T197 706 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 PEBP4Q96S96 227 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 GIN1Q9NXP7 522 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 CAMK2AQ9UQM7 478 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 ERGIC3Q9Y282 383 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 PIP5K1BO14986 540 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 TCF4P15884 667 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 PSME3P61289 254 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 TMEM225Q6GV28 225 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 AP3S1Q92572 193 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 DTD2Q96FN9 168 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 WDR77Q9BQA1 342 aaPredicted RBP16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 PNPOQ9NVS9 261 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 MARK1Q9P0L2 795 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 ZNF180Q9UJW8 692 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 SIGLEC6O43699 453 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 SERPINA3P01011 423 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 BPIP17213 487 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 GNALP38405 381 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 XKP51811 444 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 HERVK_113P63132 956 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms