RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 EVA1BQ9NVM1 165 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 DDX18Q9NVP1 670 aaKnown RBP14.89□□□□□ -0.03
SHMT2-202ENST00000414700 ACTR10Q9NZ32 417 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 PAIP2BQ9ULR5 123 aaKnown RBP14.89□□□□□ -0.03
SHMT2-202ENST00000414700 U3KQA8 63 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 ZFHX2Q9C0A1 2572 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-202ENST00000414700 ZNF292O60281 2723 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 CFAP54Q96N23 3096 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 OR5K3A6NET4 321 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 TRPC5OSA6NMA1 111 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 PRAMEF10O60809 474 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 ULK1O75385 1050 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 CD97P48960 835 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 HMGCS1Q01581 520 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 DDX39BQ13838 428 aaKnown RBP14.88□□□□□ -0.03
SHMT2-202ENST00000414700 KIR2DS3Q14952 304 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 XKR7Q5GH72 579 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 OGFRL1Q5TC84 451 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-202ENST00000414700 NKAIN2Q5VXU1 208 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 FRG2Q64ET8 278 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 ZCCHC8Q6NZY4 707 aaKnown RBP14.88□□□□□ -0.03
SHMT2-202ENST00000414700 ADCK2Q7Z695 626 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 OR7G3Q8NG95 312 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 USP7Q93009 1102 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 FRG2BQ96QU4 278 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 EHD1Q9H4M9 534 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 ELOVL6Q9H5J4 265 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 SYNPO2LQ9H987 977 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 BTBD3Q9Y2F9 522 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 DTNAQ9Y4J8 743 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 SPTBP11277 2137 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 RHPN2P1A8MT19 583 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 H0YIV9 168 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 NUDT21O43809 227 aaKnown RBP14.88□□□□□ -0.03
SHMT2-202ENST00000414700 CHEK2O96017 543 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 PVRP15151 417 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 MAGP20916 626 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 HNF4AP41235 474 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 OR1D5P58170 312 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 CSNK1G2P78368 415 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 TLR1Q15399 786 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 NXNQ6DKJ4 435 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 OR4K1Q8NGD4 311 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 SELENOMQ8WWX9 145 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 MARK4Q96L34 752 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 EFCAB11Q9BUY7 163 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 DUSP23Q9BVJ7 150 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 SLC29A3Q9BZD2 475 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 ZNF696Q9H7X3 374 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 AKTIPQ9H8T0 292 aa14.88□□□□□ -0.03
SHMT2-202ENST00000414700 FAM221BA6H8Z2 402 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 LILRA5A6NI73 299 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 YKT6O15498 198 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 LCMT2O60294 686 aaKnown RBP14.87□□□□□ -0.03
SHMT2-202ENST00000414700 SH3BGRLO75368 114 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 TNFAIP8O95379 198 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 RETP07949 1114 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 PCNAP12004 261 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 GLB1P16278 677 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 GRIA3P42263 894 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 CCR8P51685 355 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 ATXN3P54252 364 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-202ENST00000414700 PHEXP78562 749 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 GRAMD1BQ3KR37 738 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 GUSBP11Q6P575 273 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 PGM2L1Q6PCE3 622 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 SPESP1Q6UW49 350 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 LARP4Q71RC2 724 aaKnown RBP eCLIP14.87□□□□□ -0.037e-8■■□□□ 12.3
SHMT2-202ENST00000414700 OOSP2Q86WS3 158 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 ANKRD53Q8N9V6 530 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 AVL9Q8NBF6 648 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 CEP70Q8NHQ1 597 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 ZFP28Q8NHY6 868 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 FNDC8Q8TC99 324 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 FCRL4Q96PJ5 515 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-202ENST00000414700 ACPTQ9BZG2 426 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 UCK1Q9HA47 277 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 PADI4Q9UM07 663 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 SNX6Q9UNH7 406 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 APOBEC2Q9Y235 224 aaKnown RBP14.87□□□□□ -0.03
SHMT2-202ENST00000414700 CCL27Q9Y4X3 112 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 MAGEB17A8MXT2 336 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 C2orf74A8MZ97 194 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 PCDHGA12O60330 932 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 ETHE1O95571 254 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 KRT6AP02538 564 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 KRT6BP04259 564 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 AMD1P17707 334 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 CMPK1P30085 196 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 CAPZBP47756 277 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 KRT6CP48668 564 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 SPEM2Q0P670 501 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 UBAP2LQ14157 1087 aaKnown RBP14.87□□□□□ -0.03
SHMT2-202ENST00000414700 MED27Q6P2C8 311 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 TMIGD1Q6UXZ0 262 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 VN1R5Q7Z5H4 357 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 Q8N9G6 341 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-202ENST00000414700 HUS1BQ8NHY5 278 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 SNRNP27Q8WVK2 155 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms