RNA–Protein interactions for RNA: ENST00000414317.6

SNCAIP-206, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-206ENST00000414317 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNCAIP-206ENST00000414317 SEC16BQ96JE7 1060 aa12.8□□□□□ -0.36
SNCAIP-206ENST00000414317 SLC26A1Q9H2B4 701 aa12.8□□□□□ -0.36
SNCAIP-206ENST00000414317 WDR54Q9H977 334 aa12.8□□□□□ -0.36
SNCAIP-206ENST00000414317 ANKHQ9HCJ1 492 aa12.8□□□□□ -0.36
SNCAIP-206ENST00000414317 SLC22A7Q9Y694 548 aa12.8□□□□□ -0.36
SNCAIP-206ENST00000414317 URADA6NGE7 173 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 ANKDD1BA6NHY2 528 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 A8MT66 165 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 H0YIG0 161 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 E2F3O00716 465 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 CNOT3O75175 753 aaKnown RBP12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 NSA2O95478 260 aaKnown RBP12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 ITGB2P05107 769 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 SERPINA6P08185 405 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 FURINP09958 794 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 IL1RNP18510 177 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 KRT4P19013 534 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 CD22P20273 847 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 OCA2Q04671 838 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 HERC3Q15034 1050 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 GOLGA7Q7Z5G4 137 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 OR9A4Q8NGU2 314 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 OR2Y1Q8NGV0 311 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 CREB3L4Q8TEY5 395 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 UBE2E3Q969T4 207 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 TMEM109Q9BVC6 243 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 YIPF2Q9BWQ6 316 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 IPPKQ9H8X2 491 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 CTSFQ9UBX1 484 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 ZNF282Q9UDV7 671 aaPredicted RBP12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 LGALS13Q9UHV8 139 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 NXT1Q9UKK6 140 aaKnown RBP12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 GRID1Q9ULK0 1009 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 ZNF490Q9ULM2 529 aaPredicted RBP12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 POLHQ9Y253 713 aa12.79□□□□□ -0.36
SNCAIP-206ENST00000414317 IGSF10Q6WRI0 2623 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 COPEO14579 308 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 ERLIN1O75477 346 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 CLEC3AO75596 197 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 ALOX12P18054 663 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 CRHR1P34998 444 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 HNF4AP41235 474 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 SNRPNP63162 240 aaKnown RBP12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 SKP1P63208 163 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 SSPNQ14714 243 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 DEFB109BQ30KR1 87 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 LIPJQ5W064 366 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 GRHL2Q6ISB3 625 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 NIPAL1Q6NVV3 410 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 MED27Q6P2C8 311 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 ABHD13Q7L211 337 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 PRSS41Q7RTY9 318 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 RAB43Q86YS6 212 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 MYLK4Q86YV6 388 aaPredicted RBP12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 C4orf33Q8N1A6 199 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 AFAP1L2Q8N4X5 818 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 AMER3Q8N944 861 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 STT3BQ8TCJ2 826 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 THAP4Q8WY91 577 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 CCT6BQ92526 530 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 EXTL1Q92935 676 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 ATP6V1E2Q96A05 226 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 MIEF2Q96C03 454 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 SPSB2Q99619 263 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 SLC6A16Q9GZN6 736 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 RHBGQ9H310 441 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 NOL11Q9H8H0 719 aaKnown RBP12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 ACTR8Q9H981 624 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 TRPC4Q9UBN4 977 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 PCTPQ9UKL6 214 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 MAP4K5Q9Y4K4 846 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 SCN2AQ99250 2005 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 PIEZO2Q9H5I5 2752 aa12.78□□□□□ -0.36
SNCAIP-206ENST00000414317 MED13Q9UHV7 2174 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 IGLV3-12A0A075B6K2 115 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 VSTM2BA6NLU5 285 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 SGK494L7N484 410 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 ERVH48-1M5A8F1 160 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 UGDHO60701 494 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 KLHL18O94889 574 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 RPS17P08708 135 aaKnown RBP12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 ZNF888P0CJ79 500 aaPredicted RBP12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 ATP5F1P24539 256 aaPredicted RBP12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 OTX2P32243 289 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 HPDP32754 393 aaPredicted RBP12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 FOXL2P58012 376 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 STXBP1P61764 594 aaKnown RBP12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 SLC18A2Q05940 514 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 HYAL2Q12891 473 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 TBR1Q16650 682 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 TOR1AIP1Q5JTV8 583 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 BORAQ6PGQ7 559 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 TRABD2AQ86V40 505 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 SLC22A9Q8IVM8 553 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 ADAMTS17Q8TE56 1095 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 UTP15Q8TED0 518 aaKnown RBP12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 TTC9Q92623 222 aa12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 SOX17Q9H6I2 414 aaPredicted RBP12.77□□□□□ -0.36
SNCAIP-206ENST00000414317 PRM3Q9NNZ6 103 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms