RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 SPTA1P02549 2419 aa14.02□□□□□ -0.16
LIMS4-201ENST00000413601 A0A087X1B8 175 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 ZNF860A6NHJ4 632 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 MAP2K7O14733 419 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 H2AFYO75367 372 aaKnown RBP14.02□□□□□ -0.17
LIMS4-201ENST00000413601 KLHL18O94889 574 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 B3GALT4O96024 378 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 S100BP04271 92 aaPredicted RBP14.02□□□□□ -0.17
LIMS4-201ENST00000413601 C2P06681 752 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 RHOXF2BP0C7M4 288 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 CSRP3P50461 194 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 EFNA3P52797 238 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 SOX8P57073 446 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 RGS1Q08116 209 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 Q0VFX4 171 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 CDC16Q13042 620 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 VWA5B1Q5TIE3 1220 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 CENPLQ8N0S6 344 aaPredicted RBP14.02□□□□□ -0.17
LIMS4-201ENST00000413601 SNX31Q8N9S9 440 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 UHMK1Q8TAS1 419 aaKnown RBP14.02□□□□□ -0.17
LIMS4-201ENST00000413601 NT5CQ8TCD5 201 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 KCTD4Q8WVF5 259 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 VPS50Q96JG6 964 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 RHOXF2Q9BQY4 288 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 MFRPQ9BY79 579 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 FUT8Q9BYC5 575 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 ZNF552Q9H707 407 aaPredicted RBP14.02□□□□□ -0.17
LIMS4-201ENST00000413601 DNAJC11Q9NVH1 559 aa14.02□□□□□ -0.17
LIMS4-201ENST00000413601 CPAMD8Q8IZJ3 1885 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 OR2W5A6NFC9 320 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 SUPT3HB4E1H0 165 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 UBXN8O00124 270 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 CCNT2O60583 730 aaKnown RBP14.01□□□□□ -0.17
LIMS4-201ENST00000413601 DPM1O60762 260 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 SUPT3HO75486 399 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 STK16O75716 305 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 IPO13O94829 963 aaKnown RBP14.01□□□□□ -0.17
LIMS4-201ENST00000413601 HPP00738 406 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 ALDOAP04075 364 aaKnown RBP14.01□□□□□ -0.17
LIMS4-201ENST00000413601 ZNF888P0CJ79 500 aaPredicted RBP14.01□□□□□ -0.17
LIMS4-201ENST00000413601 ALOX12P18054 663 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 CXCR2P25025 360 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 TYK2P29597 1187 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 HNF4AP41235 474 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 XCR1P46094 333 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 GLRBP48167 497 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 MLLT10P55197 1068 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 EEF1A2Q05639 463 aaKnown RBP14.01□□□□□ -0.17
LIMS4-201ENST00000413601 HYAL2Q12891 473 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 SLBPQ14493 270 aaKnown RBP eCLIP14.01□□□□□ -0.17
LIMS4-201ENST00000413601 HERC3Q15034 1050 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 DEFB134Q4QY38 66 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 MFSD4BQ5TF39 518 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 IFT20Q8IY31 132 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 AFAP1L2Q8N4X5 818 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 LRRN4CLQ8ND94 238 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 TRPV3Q8NET8 790 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 OR5T3Q8NGG3 340 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 CREB3L4Q8TEY5 395 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 SLC44A1Q8WWI5 657 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 ATOH8Q96SQ7 321 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 CAPS2Q9BXY5 557 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 CD244Q9BZW8 370 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 VN1R1Q9GZP7 353 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 KLHL31Q9H511 634 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 ZNF160Q9HCG1 818 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 GPRC5BQ9NZH0 403 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 NUDT4Q9NZJ9 180 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 C5AR2Q9P296 337 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 ASB1Q9Y576 335 aa14.01□□□□□ -0.17
LIMS4-201ENST00000413601 A0A096LPK6 155 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 POC1B-GALNT4F8VUJ3 575 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 CLGNO14967 610 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 GALR3O60755 368 aaPredicted RBP14□□□□□ -0.17
LIMS4-201ENST00000413601 PRAMEF4O60810 478 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 KERAO60938 352 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 DNAJB6O75190 326 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 WISP1O95388 367 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 ALPPP05187 535 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 INHBAP08476 426 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 COX6A1P12074 109 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 CD97P48960 835 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 AGTR2P50052 363 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 SERPINB8P50452 374 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 RAB8AP61006 207 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 OLR1P78380 273 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 IGFBP7Q16270 282 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 PDK4Q16654 411 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 FAM83EQ2M2I3 478 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 MINDY4Q4G0A6 757 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 PRAMEF9Q5VWM5 478 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 JMJD6Q6NYC1 403 aaPredicted RBP14□□□□□ -0.17
LIMS4-201ENST00000413601 TMIGD1Q6UXZ0 262 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 ABHD13Q7L211 337 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 NDUFAF7Q7L592 441 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 CCDC91Q7Z6B0 441 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 HPS6Q86YV9 775 aa14□□□□□ -0.17
LIMS4-201ENST00000413601 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14□□□□□ -0.17
LIMS4-201ENST00000413601 RBMXL3Q8N7X1 1067 aaKnown RBP14□□□□□ -0.17
LIMS4-201ENST00000413601 UTP15Q8TED0 518 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms